KEGG   Cryptomeria japonica (Japanese cedar): 131030388
Entry
131030388         CDS       T10556                                 
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
  KO
K11292  transcription elongation factor SPT6
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Brite
Transcription machinery [BR:cjf03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     131030388
Chromosome and associated proteins [BR:cjf03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     131030388
SSDB
Other DBs
NCBI-GeneID: 131030388
NCBI-ProteinID: XP_057817172
LinkDB
Position
4:441589767..441612121
AA seq 1773 aa
MGARNIVSDDEEEYEESDIRDARDTEAVDEEDEEEAEEEGQDEYEKDGFIVDDVEEEEEE
ARESSDEEMKARKKKRKKREAEENYELDEDDYELLQEANVTGFHRPKSQGSKKFKRLKKA
GKNDRIEEKTGFSDEDELEEGGWTGATAEEKLKRSLFGDDEGVPPEDVAEEEDQLEEEEE
EDMGEEDEMADFIVDEEEVDENGLPVRRRRKSKKRISRQAPGISSIALQEAQDIFGDVDE
LLSRRKQGLKARGFDGLGGLDDDQGGRRLEDEFEPSILAEKYMTAKDDDIRETDVPERFQ
LSEEITGPVPHNENTVPEAKWIYEQVFGSLAVPIRKEFQHIAQLDKEEVVKDIANVLKMF
HDQKLEVPFIAMYRKEMCLNLLRDLEYSSTEAADKSADKPTDKAADKEKKSKMKMYKALW
EIQLRDRKWLLLQRRKTALKASYEKRAGEEARRDPIKWKLLETVFQSLDDAESERTIDDL
DTKFNLHFPPDEIEVEEGQFKRPKRKSMYSICRKSGLGAVSRNFGLTSEQLGKNLLAMYK
MHEVEDDSNAPEDVAAGFSAGEFGDPQSVLKGARHMAAVEISCEPAVKEYARTFYMEKAV
VTTKPTADGNNAIGSFHQYARVKWLNNKPISKFDDAQWLLIQKAEEEKLLQVTIGLPKDD
LDGTLMNEFEAFYLSDGVSRSAQLWNEQRKLILKDAICNYILPSMEKEARIVLSARAKNW
LVQDYGYQLWKRVSVAPFQRQKPDNDESSEEDAETRIMVCCQGSNKDPTTFVMLDPAGEV
LDILFTSHLSIRSKNSGLQKRKENDQQRLLKFMMDHQPHIVVLGASNLRCKYLKDDIFEV
IFKIVEEHPRDLAEGLDTINVVYADEFLPTLYENSRISQDQLPTQRGIVRRAVALGRYLQ
NPLAMVATLCGPGKEILSLKLHSLEHFLSLDDKYEAVEQVMVTVTNQVGVDINLAASHEW
MFSPLQFVAGLGPRKAASIQRAILRAGRVYSRRELLTPLEAMKRLVFINAAGFLRVRGTG
QAASGNHVMDPLDDTRIHPESYELAKKMAEDVYCEDAGQDIDDMDEETQEMAVEHVKKYP
NLLMTLDIDEYARSVEQRTSNKKRETLADVKIELVHGFKDWRTPYKEPSQDEEFYLLTGE
NEETLSVGKIVQATARRVLNNRIICDLESGLTGIIMKEQLSDDIDIDPIEKVAEGSILTC
RVKSMQKAKYLVDLTCKASELRNDNWQPQNGEVKEVKDPYFAKADTIKQSEQENARKAKE
LAKKSFKPRMIVHPRFLNISEDETIKFLSDKDAGESIIRPSLKGPTHLMLTLKIFDGVYA
HKDIVEGGKDHRDFASFLRLGKTLSIGEETFEDLDEVIDRYVDPLISNLKAILDYRKFRR
GTKAEVDDALRKEKYENPTRIPYYISVSHEHPGAFLLSYIRSTNPHHEYFGLYPKGFKFR
KRMFDNLDKLVSYFQKHINDLVQQDSLPPIRSVAAMVPMKSPGPGGSAGGGGSVGSGWGG
SATNSGGGGDGGWAGSAMDGGRGGDGGWRGSATNSGGDGWQGPMGTDWERSSTPGSRTGG
NDYHLHSASGGLPSGLPRPPNSRERGRGVRGGGSSSAGWNEGRDGGFDRGGNEGRGGGMR
GRWSEDGRNRWGRNNGRGIGSGRGANEANINNRWGRNSGDAWGSKTEEWGSNSGSRIPES
PARGAWPVSSGESELNRRGSDGWDTGKLSDGWNSAKVSDRDATLKDSTGRQEGLSKVGDD
MPSTSKDWAKQPSGWDHAAAGSNGSVGGSGWES
NT seq 5322 nt   +upstreamnt  +downstreamnt
atgggtgccagaaatattgtgtctgatgatgaagaagagtatgaagaaagtgacatcaga
gatgctcgtgatacagaggcagttgatgaagaggatgaagaggaggctgaagaggagggg
caggatgagtatgagaaagatggcttcatagttgatgatgttgaagaggaagaagaggaa
gctagagaaagtagtgatgaagaaatgaaagcaaggaaaaaaaaaaggaagaaaagggag
gctgaagagaattatgaacttgatgaagatgattatgagttactacaagaggccaatgtg
actggttttcaccgtccaaaatctcagggcagcaagaagtttaaacgccttaagaaagct
ggaaagaatgatcgcatagaggaaaagacgggcttttctgatgaggatgagttggaagag
ggtggttggacaggtgccactgcagaggaaaaattgaaacgtagtttgtttggggatgat
gaaggagtgcccccagaagatgttgcagaagaggaagaccagcttgaagaagaggaggag
gaggacatgggtgaagaagatgaaatggcagattttatagttgatgaagaagaagtggat
gaaaacggcttacctgtaaggaggaggaggaaatcaaaaaaacgaatatccaggcaagct
ccaggcatatcatctattgctttgcaagaagcacaggatatatttggtgatgtggatgaa
cttttgagtcgtcgaaagcaaggtctgaaagcaagagggtttgatggtttaggaggactt
gatgatgaccaaggtggaaggagacttgaggatgaatttgagccaagcattctggcagag
aagtacatgacagctaaggatgatgatattcgtgaaacagatgtgcctgaacgatttcag
ttgtctgaagagattactggtccggttccacacaatgagaatacagtaccagaggcaaag
tggatatatgagcaagtatttggctcattagcagtacccattaggaaagagttccagcat
attgcacagctggacaaggaagaagtagtgaaggatattgctaatgtgttaaagatgttc
catgatcaaaagttagaagtcccctttattgctatgtatcggaaagaaatgtgtctcaat
ttacttcgagatctagagtacagctctacagaagctgcagacaaatctgcagataaaccc
acagataaagccgcagacaaagaaaagaagtctaaaatgaaaatgtacaaggcattgtgg
gaaatacagcttcgggatagaaaatggcttctacttcaaaggaggaagactgctctaaaa
gcatcttatgagaaacgtgctggagaagaagcaagaagagatccaatcaaatggaagcta
ttagaaacagtttttcagtcccttgatgatgcagagtctgaacggactattgatgactta
gatacaaaatttaacctgcattttcctcccgatgaaattgaggtagaagaaggtcagttc
aagaggccaaaacgcaaatccatgtatagcatctgtcggaagtctggactgggggctgta
tcaagaaatttcggtcttacctctgagcaactgggcaagaatctattagctatgtataag
atgcatgaggttgaagatgatagtaatgcaccggaggatgtggcagctggattttctgct
ggagaatttggggatccacagtcagtgctcaaaggtgctaggcacatggcagcagtagaa
atcagttgtgagccagctgttaaggaatatgcccgtactttctatatggaaaaggcagtt
gtaactacaaagcctactgctgatggtaacaatgctataggttcgtttcatcagtatgct
agggtaaagtggctaaataacaagccaataagtaagtttgatgatgcacagtggcttctc
attcagaaagctgaagaagagaaacttcttcaggttactattggtttgcctaaggacgac
ttagatggcactttaatgaatgaatttgaagctttctatcttagtgatggggtgagcaga
tctgcacagctttggaatgaacaacgtaaattaatattgaaggatgccatatgcaattac
attttgcctagtatggagaaggaagctcgaatagtgttgtctgcaagagccaaaaactgg
ctggttcaggactatggatatcagctgtggaagagagtctcagttgcaccttttcagcgt
cagaaacctgacaatgacgagtcatctgaagaagatgcagaaacacgtataatggtctgc
tgtcaagggtccaataaagatccaacaacatttgtgatgctagatcctgctggtgaagtt
cttgatattctttttacatcacatctaagtattcgttcaaagaattctggtctgcaaaag
cgaaaggagaatgaccagcagcgccttttgaagtttatgatggatcatcaacctcatata
gttgttttgggagcctcaaatttgcgttgtaaatacttgaaggatgatatctttgaggtt
atttttaagattgtggaggagcatccacgtgatttggcagaaggcttggacacgataaat
gttgtttatgcagatgaatttttacctacactttatgagaattctcgcatctctcaggat
cagttgccaacacagagagggattgtgaggcgtgctgtggctcttggtcggtatcttcag
aatccattggccatggttgcaacattatgtggtcctggcaaggagatattatcattgaag
cttcattcactggaacatttcctgagtctagatgacaagtatgaagctgtcgaacaggta
atggttacagtaaccaaccaagttggtgttgacataaacctagcagcatcacatgaatgg
atgttttcacctctgcaatttgtagctggccttggaccaagaaaagctgcttccatacaa
agggctattttgagggctggaagggtttacagtcgcagagaattgttgacccctctagaa
gctatgaagcgacttgtatttataaatgctgctggttttttaagggttagagggactggg
caagcagcttctgggaaccatgttatggatccattggatgatactagaattcatccagag
tcatatgaactagccaagaaaatggctgaggatgtatattgtgaagatgcaggacaggat
atagatgacatggatgaggaaacacaagaaatggcagttgaacatgtcaaaaaatatccc
aatctgttaatgactcttgatatagatgaatatgctagaagcgtggaacaaaggacatcc
aataaaaagcgggaaacacttgctgacgtaaagattgaattggtacatggattcaaggat
tggcgaacaccatataaagagccatcccaggatgaggaattttatctgctaactggagaa
aatgaagagaccctttcagtggggaaaattgtacaagcaactgcccgtagagtcctaaat
aatcgcataatttgtgatctggaatcaggtttgacaggtataataatgaaggaacagctt
tctgatgatatagatatagatccaatagaaaaggttgcagaaggcagcatccttacctgt
cgggtgaaatctatgcaaaaagcaaagtatctagttgatttaacttgcaaggcgagtgag
ctgaggaatgataactggcagccgcagaatggagaggttaaggaggttaaggatccatat
tttgcgaaagcggataccattaaacaaagtgaacaagagaatgcaaggaaagcaaaggaa
cttgcaaaaaaatctttcaagcctcggatgattgtgcatccacgcttcctgaatatttca
gaggatgaaaccattaagtttttatcagataaagatgcaggagagagtattatccgtcca
agtttgaaagggcctactcacttgatgctaactctgaaaatatttgatggagtttatgct
cacaaggatattgtggaaggaggaaaagaccatagggattttgctagtttccttcgactt
gggaaaacactttcaattggggaggagacatttgaagatcttgatgaggtcatagataga
tatgtggatccgctcattagcaatttgaaggcaatccttgactacaggaaattcaggagg
ggaacaaaagcagaggttgatgatgcattacgaaaggaaaaatatgaaaatccaacaaga
attccatattatatatctgtttcacatgaacatcctggggcatttttgcttagttatatt
aggagtacaaatcctcatcacgagtattttgggctatatccaaaaggatttaagttcaga
aagagaatgtttgacaatctggacaagctggtttcctattttcaaaagcatataaatgat
cttgtccaacaagattctcttcctccaattaggtcggttgcagcaatggttcccatgaaa
agcccaggtccgggaggatctgcaggtggaggtggttctgttggaagtggttggggagga
tcagccacaaacagtggtggagggggagatggtggctgggcagggtcagccatggatggt
ggtagagggggagatggtggttggagaggatcagccactaatagcgggggagatggttgg
cagggccccatgggtacagattgggaaagatcatccacaccaggttcaagaacaggtgga
aatgattatcatcttcatagtgccagtggtgggcttccaagtggtttacctaggccacca
aacagtcgagaaaggggaaggggagtaagaggtggtggcagtagcagtgctggttggaac
gaaggaagagatggtggatttgatagaggtggaaatgagggcaggggtggaggtatgaga
ggtaggtggagcgaggatggaagaaacagatggggaagaaataatggaagaggtataggg
tctggaaggggagccaatgaagcaaatattaacaataggtgggggcgaaattctggtgat
gcatggggatcaaaaactgaggaatggggcagcaattctggcagcagaattccggaatct
cctgcacgaggagcttggcctgtgagctctggggaaagtgagttgaacagacggggaagt
gatgggtgggatactggaaaattaagcgatggctggaattctgccaaagttagtgatcgt
gatgctacattgaaagatagtacaggcagacaagagggtctcagtaaagttggtgatgac
atgccaagcacttcaaaagattgggctaaacagcctagtggatgggatcatgcagcagca
ggtagtaatgggagtgttggaggtagtggttgggagtcataa

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