Cryptomeria japonica (Japanese cedar): 131030655
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Entry
131030655 CDS
T10556
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131030655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131030655
03009 Ribosome biogenesis [BR:
cjf03009
]
131030655
04131 Membrane trafficking [BR:
cjf04131
]
131030655
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjf04147
]
131030655
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
131030655
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
131030655
Membrane trafficking [BR:
cjf04131
]
SNARE
SNARE associated proteins
Others
131030655
Autophagy
Aggrephagy
Other aggrephagy associated proteins
131030655
Exosome [BR:
cjf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131030655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_2
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
Mg_chelatase
AAA_28
nSTAND3
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
Vps4_C
Viral_helicase1
ABC_tran
AAA_7
AAA_24
NB-ARC
TsaE
NACHT
DUF815
Sigma54_activat
Zeta_toxin
Sigma54_activ_2
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
131030655
NCBI-ProteinID:
XP_057817551
LinkDB
All DBs
Position
4:complement(424405711..424409974)
Genome browser
AA seq
806 aa
AA seq
DB search
MAHKGESSEPKGTKRDFSTAILERKKAANRLVVDEAINDDNSVVCLHPETMEKLQLFRGD
TILIKGKKRKDTICIALADETCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCV
VSPDTEIFCEGEPVKREDEDRLDEIGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGSSNPSALRETVVEVPNVTW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDESSRYQI
FKSCLRKSPVSKDVDLMALARYTQGFSGADITEICQRACKYAIRENIEKDIERERKRSEN
PEAMDEDDSDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPD
RPAGTAAGASDVFATGDSKDDDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggctcacaagggagagtcttcagaaccgaaaggaacgaaaagggattttagcacagca
attttagagcgaaagaaggcggcaaatcggctggttgtggacgaagccattaacgatgat
aactcggttgtttgcctgcacccagaaaccatggaaaaactacaattgttccgtggagac
acaatccttataaagggaaagaagaggaaggatacgatctgtattgccctagcagacgag
acttgcgaagagcctaagattagaatgaacaaggtcgtgcggtcgaatctgagggtgcgt
ttgggagacgtggtttctgtccaccaatgtcccgatgtcaagtacggcaagcgcgtccat
attcttcctattgatgacaccatcgagggcgttactgggaatttgtttgatgcctattta
aagccctatttcttggaagcttatcgtccagtgagaaaaggggatcttttccttgtaaga
ggtgggatgcgtagtgtagaatttaaggtaattgagacagaccctggggaatattgtgtt
gtttcgccagatactgaaattttctgtgagggggagcccgtaaagcgggaggatgaagat
agattagatgaaataggttatgatgatgttggtggtgtacggaaacaaatggcccagatc
cgtgaattggtagaacttcctctcagacacccacaactctttaaatcaattggtgtgaag
cccccaaagggtattctgctttatgggccaccaggttctgggaaaactttaattgcaagg
gcagttgcaaatgaaaccggtgccttctttttctgtatcaacggacctgaaattatgtca
aagctggctggagaaagcgaaagcaacctccggaaggcttttgaggaggctgagaagaat
gccccttccattatatttattgatgaaattgattccatagctcccaagagggaaaaaacc
cacggtgaagttgagaggagaattgtttctcaacttcttacacttatggatggacttaaa
tctcgtgcccatgttattgttattggagcaactaaccggccaaatagtattgacccagca
ctcagaaggtttggaaggtttgacagggaaattgatattggggttccggatgaagtaggc
agattggaagtgcttcgtatccatacgaagaatatgaagctctctgatgatgttgatctt
gaaaggattgctaaggatacccatggatatgtcggagcagatcttgcagctttgtgcact
gaggctgcacttcagtgcattagggaaaagatggatgtcattgacttagaagatgagaca
atagatgctgaaattctaaattccatggccgttactaatgagcacttccagactgcattg
ggctctagtaacccctctgctctgcgtgaaaccgtggtcgaagttccaaatgtcacttgg
gaagatattggagggttggaaaatgtcaagagggagcttcaagagacagttcaatatcca
gtggagcatcctgagaaattcgaaaaatttggtatgtctccttcaaaaggagtgctattc
tatgggccaccgggttgtggaaagacattacttgcaaaagccattgctaatgaatgccag
gccaatttcatcagtgtgaaaggacctgaattgttaacaatgtggtttggagagagtgag
gccaatgtgagggaaatttttgataaagccagagggtcagctccttgcgtcctatttttt
gatgagcttgattctattgctacacagcgtggaagtagtgttggggatgctggtggtgct
gcagacagagtccttaaccagttgttgacggaaatggatggtatgacggccaagaaaaca
gttttcattattggtgctacaaataggcctgatatcatcgatcctgcattgttaaggcct
ggccgacttgaccagttgatttatattcccttgcctgacgagtcctcgcggtatcaaatt
ttcaaatcttgcttgagaaagtcacccgtctcaaaggatgttgacctaatggcactggcc
cgttacacccaaggattcagtggagctgatattacggagatttgtcagcgggcttgcaag
tatgccattagagaaaatattgaaaaggatattgaacgagaacgaaaaagaagtgagaat
cccgaggcaatggatgaggatgatagtgacgaggtatctgaaataaaagctgctcatttt
gaggagtctatgaaatacgcccgaagaagtgtcagtgatgctgatattcggaagtatcaa
gcctttgcacaaacacttcagcaatctcgaggctttggttctgaattccgatttccagat
agacctgctggcactgctgctggagcttcggatgtatttgctactggagatagtaaagat
gacgatgacttgtacagttag
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