Cryptomeria japonica (Japanese cedar): 131030885
Help
Entry
131030885 CDS
T10556
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjf03009
]
131030885
Enzymes [BR:
cjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131030885
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
90S particles
Helicases
131030885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
DUF6930
Motif
Other DBs
NCBI-GeneID:
131030885
NCBI-ProteinID:
XP_057817822
LinkDB
All DBs
Position
10:128600298..128639673
Genome browser
AA seq
488 aa
AA seq
DB search
MANSEDEEDSPTTAEPSLFSKGALKQRKKKAAQPEHRPSPPKPKIFTSDELTGFEELGLS
EWAVQICRELGMKQATPVQKQCIPEILRGKDVMGIAQTGSGKTAAFALPILNKLAENPYG
VFALVITPTRELAYQLAEQFRALGSPLHLRCTVVVGGMNLITQTQALMERPHVVIATPGR
LKSLLTENRDVPNVLSRAKFLVLDEADRVLDVGFEDELKAIFQYLPKERQTLLFSATMTG
NLKALHELSGDKAYFYEAYEGFKTVESLKQQYVFVPENVKDVYLVHIISTMEDNGIRSAM
IFVSTCRTCHLLSLLLEEVGLEAVALHSLKTQSSRLAAVHRFKSGQVPILLATDVASRGL
DIPTVDLVINYDIPRYPRDYVHRVGRTARAGRVGQAVSIVTQYQVKLIHEIEAVIGKQLE
EYDCKEDEVLKGITQVYKAKRMATMRMVDDGFEDKAKEKKEIKLKMLVERGLLSKDHKKK
RKRKNGDK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactctgaagatgaagaggattcaccaacaacagcagaaccgtccctcttctca
aaaggcgccttaaagcaaaggaagaaaaaggcagctcaaccagagcatcggccatcccca
cccaaacctaaaatttttacttccgacgagttaacgggctttgaagagttagggctatca
gaatgggctgtacagatatgcagagagctgggcatgaagcaggcaacacccgttcaaaaa
caatgcattccagaaatcctcagagggaaggacgtgatgggcatagcgcagacgggcagc
ggcaagacggcggcatttgcgctgcccattctgaacaaactggcggagaatccgtatggg
gtgtttgcactggtgattactcctacgagggaattggcctatcagctggcggagcaattc
agagccctcggctccccacttcatctgcgctgcacggtggtggtgggcgggatgaatttg
atcactcagacccaggccttgatggagcggccacatgttgtcattgccacgccgggccgt
ttgaagtctctgcttacggaaaatcgtgacgtccctaatgtcctttcgagggccaagttt
cttgttttggatgaagcagatcgtgtgttggatgtgggctttgaggatgaactaaaggca
atatttcagtatttgcctaaagaacggcaaacccttttgttttcagcaacaatgaccggt
aatttaaaagcactgcatgagttgtctggagacaaggcatacttttatgaagcatatgag
gggtttaagacagttgaatctttgaagcagcagtatgtttttgttcctgaaaatgtaaag
gatgtgtatcttgtccacattatttccaccatggaagataatggcatcaggtctgccatg
atttttgtttccacttgcaggacttgccatcttcttagtttgttgttggaggaagttggt
ctggaagcagtggcattacattctctcaaaacacagtcatcaaggcttgctgctgttcat
cgtttcaaatctggccaggtcccaattttgttagcaactgatgtagcgagtcgtggtctt
gacattccaactgttgatcttgttatcaattatgatatcccaaggtaccctcgtgactac
gttcatcgagtaggccgtactgcaagggctgggagggtagggcaagctgtgagcatagtg
acccagtatcaagtaaagcttattcatgaaatagaggctgtgattggtaaacagctggag
gaatatgactgcaaagaggatgaggtgctcaaaggtatcacacaggtgtataaagccaaa
cggatggcaacaatgaggatggttgatgatgggtttgaagacaaagcaaaagaaaagaaa
gaaataaaactaaaaatgcttgtagaaaggggattgctcagtaaggaccataagaaaaaa
aggaaaagaaaaaacggggacaaatag
DBGET
integrated database retrieval system
