Cryptomeria japonica (Japanese cedar): 131030965
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Entry
131030965 CDS
T10556
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-2
KO
K03265
peptide chain release factor subunit 1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131030965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131030965
03012 Translation factors [BR:
cjf03012
]
131030965
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
131030965
Translation factors [BR:
cjf03012
]
Eukaryotic type
Release factors
131030965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
M157_N_1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
131030965
NCBI-ProteinID:
XP_059077640
LinkDB
All DBs
Position
5:712682241..712693634
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AA seq
436 aa
AA seq
DB search
MAEAQETDKNIEIWKIKKLIKALEAARGSGTSMISLVMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYSKVPPKGLVLYTGTILTEDGKEKKVTFDFEPFKPIN
ASLYLCDSRFHTEALNELLASDEKFGFIVMDGNGTLFGTLSGNAREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDARLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFAEISQDTG
KYVFGIDDTLKALEAGAVETLIVWESLDINRYILNNSVTGDTLIKHLNKEAELDLGNFKD
QDSGAVLEVQEKMSLLEWFATEYKNFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDL
RTFDELSDDDGVYESE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagctcaggaaactgataagaacattgagatatggaagatcaaaaaattaatt
aaggccttggaagctgccaggggtagcggtacaagtatgatttctttggtaatgcctcca
agggatcagatttctcgtgtcacgaaaatgcttggtgacgagtttggaactgcatcaaac
attaagagcagggttaaccgacaatcagttttaggagcaataacttctgctcagcaaaga
ctgaagctttacagtaaagttccaccaaagggattggtgctttatacaggaactattctc
acagaagacggaaaggaaaagaaagtaacatttgattttgaacctttcaagcccataaat
gcatcattgtatctttgtgatagtagattccacacagaggccctgaatgaacttcttgca
tctgatgagaagtttggatttatagttatggatggcaatggtactctttttggaaccttg
agtggtaatgctcgcgaagttcttcacaagttcactgtagatttgcctaagaagcatgga
aggggaggacaatcagctttgcgttttgcacgtcttcgtatggagaaacgtcacaattat
gttcggaaaacggcagagctagccactcagttcttcattaatcctgctaccagtcagcca
aacgttgctggtttgatcttggcaggatctgcagattttaagactgaattgagccaatct
gatatgtttgatgccaggcttcaggcaaagatactgaatgttgttgatgtatcatatggt
ggagagaatggatttaatcaagctattgagctgtctgctgagattctatcaaatgtcaag
tttattcaagaaaagcgcttgatagggaaatattttgcagaaataagtcaggatacaggt
aagtatgtatttggtattgatgatactctaaaggcactggaggcgggagctgttgaaaca
ctgattgtgtgggagagcctagatatcaacagatatatactgaataatagtgtcactggt
gatactctcattaagcacttaaacaaagaggcagaacttgatttaggcaatttcaaggat
caagactcaggagcagtgctggaagttcaagagaagatgtccttgttggagtggttcgct
actgagtacaaaaattttggctgtacgcttgaatttgtgactaataaatcacaggaaggc
tctcagttctgcagaggatttggtggaatcggtgggatcctaagataccagttagatttg
cgaacctttgatgagttgtctgacgatgatggtgtctatgaatctgaatga
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