Cryptomeria japonica (Japanese cedar): 131031561
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Entry
131031561 CDS
T10556
Name
(RefSeq) two-component response regulator ORR23 isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131031561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjf03000
]
131031561
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
131031561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
131031561
NCBI-ProteinID:
XP_057818693
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All DBs
Position
8:151261088..151264344
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AA seq
518 aa
AA seq
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MSSAGGEEGMMMTLSMRKKRQQRVEKFSPKGLRVLLVDDNPLCVASLERMLLQCQYNVTL
CPRVSQAVSLLSESRGRFDIVMCEVYLQEDDGFKLLEIAGLGSDLPVVLMSAKGETSVVM
RGVTHGACDFLIKPIRMEELRNIWQHVVRRRHRQPYQEHCKLNTYVWDDSMGGVLSDGGR
TKDSAECCSKKRKDQAPLQESDTEQIIEDISGLKKARVHWTVQLHQQFISAVNQLQIDKA
VPKRILEIMKVQGLTRENVASHLQKYRLYLRRLSGTIPEPRPIASFQAAGEGKSGGSMQI
RQGGRNNQQQQQDQYNQHQSLSPPSTLKALNIRGGGTTSSSRSSGGCGNGVIDKATLISL
QQYQAYEQKQAAAIEAQSSSIGGLHIETSGGLSRKSRKKNRFATDNPMAVPVAAPDGLNS
SNNNISVKVEDIIANSQSSSLSFTGSTGKISFNAQEEQKPEKFSSWNDTEDLFVDKFVHE
YEFPNLAVPDQDFMSTSAMPVAADISDYLIDDLLAQSK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgctggcggagaggagggaatgatgatgaccttgtcgatgaggaagaagcgg
cagcagcgagttgagaagtttagtcccaagggattgagggttttacttgttgacgacaat
cctctgtgtgttgcgtctctggagagaatgcttctgcaatgtcagtataatgtgacattg
tgtccgcgcgtatcgcaagcggtttcgttgctgtcggagagcagagggaggtttgatata
gttatgtgcgaggtgtatttgcaggaagatgacggctttaaattactggagatcgccggg
ttggggtcagatttgcctgttgtattgatgtctgcaaaaggagaaacgagcgtggtaatg
cgaggcgtaacacatggcgcctgtgatttcttgatcaaaccgattcgaatggaggagctc
cgcaacatttggcagcatgttgttcggaggaggcatcgacagccgtaccaggagcactgt
aagttaaatacttatgtgtgggacgacagtatgggaggcgttctatccgacggcgggaga
acaaaggattctgccgagtgttgttcgaaaaagagaaaagatcaagctccacttcaggag
agtgacacggagcagatcattgaagacatcagcggcctcaagaaggctcgtgtgcattgg
accgtccagctccatcaacagtttatcagtgctgtaaaccagctgcaaatcgacaaggcg
gttcctaagaggatactagaaatcatgaaagtgcagggcctcactcgagagaacgttgcg
agccatttacagaagtaccggctctacttgaggcgtctgagcgggacaattccagagcca
cgaccgattgcttcgttccaggctgccggagaaggcaaatccggtggttccatgcaaatc
cggcaaggcggccgtaataatcagcaacaacagcaggaccagtacaaccagcatcaatcc
ctctcgccgccctccactttgaaggctttaaatattcgaggcggcggaacgacatcttct
tctcggagcagtggcggctgcggcaatggagtcatagacaaagcaaccctaatttccctg
caacagtaccaagcttacgagcagaagcaggcggccgcaattgaggcacaatcaagttcc
ataggaggtctccatatcgaaaccagtgggggtttatctcgtaaatcgcgaaagaagaat
cgctttgcaactgacaaccctatggcggtgcctgttgctgcgcctgacggcttaaacagc
agcaacaataatatctctgtcaaggttgaggacatcatcgccaattcacaatcctcctcc
ctttcattcacaggttccactggaaagatatcgtttaatgctcaagaagaacaaaagcct
gagaaattctcatcatggaatgacacggaagatttgttcgtggacaagtttgttcacgaa
tatgagtttcctaatttagcagtccccgatcaagattttatgtcaacttctgctatgcct
gttgctgcagatatttcagattatctcattgacgatttgctggctcagtctaagtga
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