Cryptomeria japonica (Japanese cedar): 131031999
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Entry
131031999 CDS
T10556
Name
(RefSeq) transcription factor IIIB 60 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjf03021
]
131031999
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
131031999
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
FHIPEP
Motif
Other DBs
NCBI-GeneID:
131031999
NCBI-ProteinID:
XP_057818863
LinkDB
All DBs
Position
4
Genome browser
AA seq
746 aa
AA seq
DB search
MVWCTHCGKDQPTERDDINGFICCTGCGRVHEDNIFSSDPTFVKSAGGQSQLSGNFIRDG
QYCSYGRLDGDLNHDYGFRTDSHLKTLEKGKEEIEIIAESLCISGREAMVNAGHRLYIIA
VERNFTRGRRTKQVAAACLYIVCRQEEKPFLLIDFSDVLQVNVYVLGAVFLQLCKLLRLE
QHPIIQKPVDPSLFIHRFTDRLLGRTTSTKQYHAISNTALRILSSMKRDWMQTGRKPSGV
CGAALYISALSHGFGCTKADVVSIVHICEATLTKRLIEFEKTESGSLTTEEFVAKAKELE
AEMQSMKVPTRNSEIKGIKGITELLCEHKGTDAKHFAHGLCSHCYNEFVKVSGGIHGGSA
PPAFQRAEEERRKESLQIKQDKGFFDNDEDSISCHKEDQENLEGNVKMTREKVKLTNEEM
VEDGGACSQNGDNATGSRYKNTASTDVGTDNRNQDGQNGVTESCISEAAIGCPAETDDWS
QLQFPESYKVGDDMGEELETLSDIDDEEVDRYLHNEEEVRLKTIIWTEMNKEYLEEQATK
EEAIAAAEAAHAAALAAAAEGAPDAVELAAAAAAAVARLKKDKQRKRAEEAKNKVPPQSA
AEATRQMLEKKKLSSKVNYDVLERLFEDNKKNVTQTSDGGKDIHNQSPAENVKRTRSVLW
ADEDSADFKNSKRQALQGEATEGNAVDFKEEGAEFKEERTDPNMEDGLEGDDFDVEGPDG
LDNEHFQPYKLQYGHEVEYEYDYEDY
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggtttggtgcactcattgtggaaaggaccagcccactgagcgtgatgatattaatgga
ttcatatgctgcactggttgtggacgtgttcatgaggataatattttctcatctgatcca
acttttgtgaaaagtgctgggggtcagagtcaattatcggggaactttattagggatggt
caatattgctcatatggacgccttgatggagatttaaatcacgactatgggttcaggaca
gactcacatctcaaaacattagaaaagggaaaagaggagattgagattattgcagaaagc
ttatgcattagtggcagggaggcaatggtcaatgcagggcatcgcctatatataattgct
gttgaacgtaatttcactagaggtcggcggacaaagcaagttgcagcagcttgtctttat
attgtgtgtaggcaggaagaaaagccatttttgctcatcgatttttcagatgtcttacaa
gtaaatgtctatgtattaggtgctgtatttttgcaactttgcaaattgttgagacttgag
caacatccgatcattcaaaagccagttgatcccagcttatttattcatcgttttacagat
cgcttacttggcagaacaacatccacaaagcaatatcatgctatatcaaacactgcctta
cgaattctatcaagtatgaagcgtgattggatgcagactgggagaaaaccaagtggagtg
tgtggtgcagcattgtacatatctgccctctcgcatggctttggatgcactaaagcagat
gttgttagtattgtgcacatttgtgaggcaacattgacaaagcgattgattgaatttgaa
aaaacagaatcaggcagtttaactacagaggagtttgtagccaaggcaaaggagcttgag
gcagaaatgcagtcaatgaaagttccaacaagaaactcagagattaaaggaataaaaggc
attacagaactactttgtgagcacaagggaacagatgctaagcattttgctcatgggctt
tgcagtcactgttacaatgagtttgtcaaagtctctggaggtatccacggaggatctgca
ccacctgcattccagcgcgctgaagaggagaggagaaaggagtccttacagataaaacaa
gacaaaggattttttgataatgatgaagacagtatttcctgtcataaagaagaccaagaa
aacttggaaggcaatgtgaaaatgacaagggagaaggtgaagctaacaaatgaggaaatg
gttgaggatggaggggcatgttctcaaaatggagataatgctacgggttcaagatataag
aatacagcttctacagatgtaggcacagataatcgaaatcaggatggtcagaatggtgtt
acagagagttgtatatcagaggctgcaataggttgtccagcagaaacagatgattggagt
caattgcagtttccggaaagttataaagtaggagatgatatgggcgaggaattagaaact
ctgtctgacattgatgacgaggaggttgatcgatatttgcataatgaggaggaagtacgg
ttgaaaactataatctggacagaaatgaataaggagtatcttgaggaacaagcaacaaaa
gaggaagcaattgcagctgcagaagcagctcatgctgcggctctggctgctgcagcagaa
ggggcacctgatgctgttgaacttgcagcagcagcagctgctgccgtggcaagattgaaa
aaggataagcagcggaaaagagctgaagaagcaaagaacaaagtgccacctcagtcagca
gctgaagctacacgtcagatgctcgaaaaaaagaagctaagttcaaaagtcaactacgat
gtacttgaaaggctttttgaagacaataaaaagaatgtcacacagacatcagatggaggc
aaagatatacataatcaatcaccagctgaaaatgtgaagagaacccgctctgtcttgtgg
gcagatgaggattctgctgactttaaaaattcaaaaagacaagctcttcagggtgaagcg
actgaaggaaatgcagtcgattttaaagaagagggggctgagttcaaagaagagagaact
gacccaaacatggaagatgggctggaaggtgatgactttgacgttgaagggcccgatgga
ttggataatgaacacttccaaccatacaagctgcagtatggacatgaagttgaatatgaa
tatgattatgaagactactga
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