KEGG   Cryptomeria japonica (Japanese cedar): 131032362
Entry
131032362         CDS       T10556                                 
Name
(RefSeq) uncharacterized protein LOC131032362
  KO
K12828  splicing factor 3B subunit 1
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131032362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjf03041]
    131032362
   03036 Chromosome and associated proteins [BR:cjf03036]
    131032362
Spliceosome [BR:cjf03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    131032362
 Complex B
    131032362
 Complex C
   U2 SnRNP specific factors
    131032362
Chromosome and associated proteins [BR:cjf03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    131032362
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N Htt_N-HEAT_1 HEAT_ECM29 HEAT_2 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N UME
Other DBs
NCBI-GeneID: 131032362
NCBI-ProteinID: XP_059065494
LinkDB
Position
8:complement(686225800..686230615)
AA seq 1274 aa
MDTLDADIERIQEERRKKEQEMAALSAVTFDKDLYGGNNRFEGYERSIPVNNEDEEEGDA
AEREIARKLASYTAPKSLLKDLPQTGEDDDLGFKKPQRIIDREDDYRKRRLNRIISPDRN
DAFAMGDKTPDTAVRTYADVMREEALKREKEETLRLIAKKHQEEKEKGKEAGATQQDVSQ
ASQKRRNRWDQAQEQENAAKKAKVSLASSDWDAPDATPGISRWDATPTPGRANVDATPAI
NRRNRWDETPTPGRLADADATPVGGVTPGATPAGMTWDATPKLSGLATPTPKKQRSRWDE
TPATMGSATPMAGATPSSFTPGVTPMGGIDLPTPTPTAINLRGAITPEQYNLLRWEKDIE
ERNRPLTDEELDAMFPLEGYKILDPPASYVPIRTPARKLLATPTPLMGTPLYSIPEENRG
QQFDVPKEVPGGLPFMKPEDYQYFGVLLNEEDEEELSPEDQKERKIMKLLLKVKNGTPPQ
RKTALRQLTDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRVLYKLDELVRPFV
HKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARA
FSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHLRSLVEIIE
HGLNDENQKVRTITALSLVALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIG
FIIPLMDAMYASYYTKEVMGILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRAEIL
PEFFRNFWVRRMALDRRNYRQLVDTTVEIANKVGVADIVGRTVEDLKDESEPYRRMVMET
IEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLP
QICGTIKWRLNNKSAKVRQQAADLISRIAVIMKQCQEEQLMGHLGVVLYEYLGEEYPEVL
GSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFV
PAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRV
CTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVT
PLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALLHLLNYVWPNIFETSPHVINAV
MEAIEGMRVALGAAGVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDGLVAAYPTLEDE
FNNVYSRPELIMFV
NT seq 3825 nt   +upstreamnt  +downstreamnt
atggatacgctggacgcagacatagaaaggattcaggaggaaagacggaaaaaagaacag
gaaatggcagcgctgtccgccgttacatttgacaaagatttgtacgggggaaacaacaga
tttgagggttatgagcgttccattcccgtgaataatgaggatgaagaggaaggggacgcg
gcagagagagagattgcgaggaaattggcgtcttacacggcccccaagtctctgctaaag
gatttgccacagactggggaggatgacgatctagggtttaagaagccgcagaggattatt
gatagagaggatgattatagaaaacggaggctcaacagaattatatcgcccgacagaaat
gatgcctttgccatgggggataaaaccccggacactgcagttcgaacctatgcggatgtt
atgcgcgaggaggcactgaagagggagaaagaggaaacgttgaggctgattgcgaagaag
catcaggaggagaaggagaaggggaaggaggccggggccactcagcaggatgtgtcgcag
gcatctcagaaaaggaggaataggtgggatcaggctcaggaacaggagaatgctgccaaa
aaggcaaaagtttctttggcttcttcggattgggacgcccctgatgccacccccgggatt
agtagatgggatgccacaccgactccagggagggcaaatgttgatgccacgcctgcaatt
aacaggcggaatagatgggacgaaacacctactcctgggaggcttgccgatgcggatgca
actcctgttggaggcgtcacacctggtgctactccggcagggatgacttgggatgcaact
ccaaagctttctggattggccactcctacacccaagaagcagaggtcaaggtgggacgag
acaccggcaacaatgggcagtgccacaccaatggccggtgcaacgccttcatcctttacg
ccaggtgttactcccatgggtgggattgatctgcctacacccactcctacggctatcaat
ttgaggggtgccattactcctgagcagtataatttgctgaggtgggagaaggatatcgaa
gagagaaataggcctctgacagatgaggagctggatgctatgtttccactggaggggtat
aagatcttggatcctccagcttcttacgtgcccatcaggactccagctaggaagctcctt
gcgacacccactccactcatgggtacaccactttacagtattcccgaggagaatagaggc
cagcagtttgatgtccccaaagaggttcctggtggcttgcctttcatgaaacctgaagat
tatcagtactttggtgtgctattgaatgaggaagatgaggaggagctttctccagaggat
cagaaagagcgtaagataatgaagctgttgctgaaggtaaaaaatggtacgccaccacag
agaaaaacagcattgaggcagcttactgataaagcaagggagtttggtgctggacctctt
tttaatcagattttgcctttgctcatgtccccaacgctggaagatcaagagaggcatctc
ctagtgaaggttattgatcgagttctttacaagttagacgaactggttaggccatttgta
cataagattcttgtggttattgagccacttcttatagatgaagattactatgcccgtgtg
gaagggagagaaattatctcaaatttgagcaaagctgcaggactggccactatgattgct
gccatgagacctgatattgataatattgatgaatatgttcgaaacacaactgcaagggct
tttagtgttgttgcttctgctttaggaattccagctctcctgccttttttgaaggcagtg
tgtcaaagcaagaagtcatggcaagctcgacataccggtataaagattgttcaacaaata
gctattcttatgggttgtgctgttctcccacatttgaggtcactagttgaaatcatagag
cacggtcttaatgatgagaatcaaaaagtgagaactatcactgcattgtcccttgttgcc
cttgcagaggcggcagcaccttatggtattgaaagttttgattctgttcttaaacctctg
tggaagggaatccgctcccatagaggtaaggttcttgcagccttcttgaaggcaattggg
tttatcatacctttaatggatgctatgtatgcaagttactatacaaaggaagtgatgggc
atcttgatccgtgagttccagtctcctgatgaagaaatgaagaagattgttctgaaagtt
gttaaacaatgtgtcagtacagagggtgttgaagcagattatatcagagcagaaattctt
cctgaatttttccgtaatttctgggttcgtagaatggctctggatcgaaggaactacaga
caactggtagatacaactgttgagatagctaacaaggtaggagttgcagacattgtggga
agaactgttgaagaccttaaagatgaaagtgaaccttaccgtcggatggtaatggagaca
attgaaaaagtagttgccaacttgggtgcttcagatattgatgctcgcttggaggaattg
ctgattgatggtatactttatgctttccaagagcagaccagcgatgatgcaaatgtgatg
ttgaatggttttggtgctgtagtgaacgcgctaggtcagagggttaaaccatacttgcct
caaatttgtggtaccatcaagtggagactcaataacaagagtgcaaaggtccgacagcaa
gctgcagatcttatttcccgaattgctgttataatgaagcagtgtcaagaagagcagctc
atgggtcacttgggtgttgtgctttatgaatacttgggagaagaatatccagaagtttta
ggatccattctaggggcattgaaggctatagtaaatgttattggtatgaccaagatgact
cctccaattaaagatttgttaccccgtttaactccaattttgaaaaatagacacgaaaag
gtccaggagaattgtatagatctcgttggaagaattgctgacaggggagcagagtttgta
cctgctcgagaatggatgagaatttgctttgaactgttggagatgttgaaagcccataag
aaggggattcgaagggcaaccgtgaatacatttggatacattgcaaaggcaattggacca
caggatgtgcttgccactttgttgaataatttaaaggttcaagaacgccagaatcgtgtc
tgtacgacagtagctattgctatagtggcagagacttgttctccattcactgttctgcca
gcactcatgaatgaatatcgggtgccagagttgaatgttcaaaatggtgtgcttaagtca
ctttcatttctttttgaatatataggggagatgggaaaggattacatatatgctgtgaca
ccattacttgaagatgcacttatggatcgagatctcgtgcataggcaaacagcagcttcg
gcagtgaaacacatggctttgggtgttgcaggacttggctgtgaggatgctttgctacac
ttgctaaattatgtatggccaaatatatttgagacatcacctcatgtcataaatgctgtc
atggaagcaattgaagggatgcgggttgctttaggagcagcaggtgttctcaattactgc
ctccaaggtttatttcacccagcaagaaaagttcgtgaggtctactggaagatttataac
tcactttacattggagctcaagatggacttgtggctgcttaccccactctagaagacgag
tttaataatgtatacagtcgtccagagttaattatgtttgtttag

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