Cryptomeria japonica (Japanese cedar): 131032364
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Entry
131032364 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131032364 isoform X1
KO
K07456
DNA mismatch repair protein MutS2
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
131032364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjf03400
]
131032364
DNA repair and recombination proteins [BR:
cjf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
131032364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MSSS
Fibritin_C
nSTAND3
Motif
Other DBs
NCBI-GeneID:
131032364
NCBI-ProteinID:
XP_057819291
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All DBs
Position
8:complement(687232223..687321126)
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AA seq
929 aa
AA seq
DB search
MAYSTSFFHSSKHAAVIKKKHNRDAHRLLCIFDEGLSRHKNRKIKCPQSCYKGKLIKFSN
DKTKRYCQSKQSSSLPFIWEKSYLDKHSMKEDAKMDSELSEITRDALSTEGGKMVDSGNV
EEDTFICLEWQSLCTQVAQYTSTSMCYLLAKEGCFPIGSDLHDSEELLDQTAAALSLPDA
LDFSGIQDIRKIIKSAVLGEACTVNELCAVKRTLQSARIIYDKLCSYASEMNVSVNGNST
RIKSQDMKELDPLFKIFEGADFCTNLENELDHCLDCAFLSVLDRASPALASVRSNRGSNM
EAIETLIKETAKRIAEVGGIDSPLVTKRRSRLCVGIRAAKKSLLPGGIVLDVSSSGATYF
MEPKDALYLNNMEVQLAAAERSEECAILGRLVSRIASESTKIINVLERVIVIDLACARAD
HARWQGAVRPFFTQKEHITGSSILGTEMNTEINETQCSFVDIEGIQHPILLEHALQKPSS
KFSSLRHSSTQKHDASYGGSRNVETVQSSDDNKVKLPVPIDIKIGPQKRVVIISGPNAGG
KTATMKTLGLAAIMAKAGIFLAAKGQPRLPWFDHIMADIGDNQSLEQSLSTYSAHIKRLC
KIMELGTRKSLVLIDEIGSGTDPSEGMALSASILQHLACHVNLTVVTTHYEDLTRLKDED
DRFENAAMEFDILALLPTYHILWGTTGQSNALDIAQSLEFDPNILSRAREWVKKLLPDRQ
QERQGGLFESLSKQRYELQDQARTVAAILSDATELYHELLGETEDLNEREVDLKLMEVDA
VNKEITEAKYQIDEAIAKFEKKIYGENTDISEFMRKTQADIASIVGKYCSTAKEVLNSQT
NTVQTNLPIPKIGDQVVVKRLGSKLATVAETPSKDDGSLLVQLGSMKFRVKASDIEKIVS
SKEADTSGYVSVRQKKRRNIKSQKNVRQI
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcctatagcactagttttttccatagttcaaagcacgctgctgttattaaaaagaaa
cataacagggatgcacatagacttttgtgtatcttcgacgaaggcttatcaaggcacaaa
aacaggaaaatcaaatgtcctcagagttgctacaagggcaaattaataaaattttctaat
gataaaactaaaagatattgccaatccaaacaatcatcttcgttacctttcatttgggag
aagagctatttagataaacattccatgaaagaagatgctaaaatggattctgagttgagt
gaaattacgagggatgctttgagcacagaaggtggaaagatggttgactcaggaaatgtt
gaggaagatacctttatttgtttagaatggcaatctctctgcactcaggtagcgcaatat
acatctaccagcatgtgctatttgttggctaaagaaggatgttttcccattggtagtgat
ctgcatgatagtgaggaattgctggatcaaacagctgctgcactctcgcttcctgatgct
ctggatttttctggaattcaagatattaggaaaataataaaatctgctgttttgggggaa
gcgtgtactgttaatgagctttgtgctgtaaagaggacacttcagtcagcaagaatcatt
tatgataagctctgcagttatgcatcagaaatgaatgtttctgttaatggaaattcaaca
agaattaagtcacaagatatgaaggaacttgatcctcttttcaaaatctttgaaggagca
gatttttgtaccaacttagaaaatgaattggatcattgccttgactgtgcttttttgtca
gttctggatagagcaagccctgccttggcatctgtaaggtcgaacagagggagcaatatg
gaggctattgaaacattgattaaagagactgctaaaaggattgcagaagttggggggatt
gacagtccattggttacaaaaagaaggtcacgattgtgtgttggaattagagctgccaag
aagtctttacttcctggtggtatagttttggatgtcagcagttcgggtgcaacatatttt
atggaacctaaggatgcattgtacctgaataacatggaagtgcaactggctgctgcagag
cgatctgaggaatgtgctatcttgggcaggctggtctccaggatagcaagtgaaagtacc
aagatcataaatgttttagaaagggtcatagttatagatcttgcttgtgctagagctgat
catgctcgttggcaaggagctgtgcgtcctttttttacccagaaagaacacattacagga
agcagtattttaggaacggagatgaatactgaaatcaatgaaactcagtgttcatttgtt
gacattgaaggtattcaacatcctatactcttagagcacgcacttcagaaaccatcttcc
aaattcagttctctaaggcattcatccacccagaaacatgatgcttcttatggtggttcc
agaaatgttgagacagtccagagctctgatgacaataaagtgaaattacctgtgccaata
gatattaaaatagggcctcaaaaaagggtagtgatcatttctggtcctaatgctggagga
aaaacagcaacaatgaagacgctaggacttgctgctatcatggcaaaagctggcatattc
ttggcagccaagggtcaaccaaggttaccgtggtttgaccatataatggcagacattggg
gataatcagtctttggagcaaagtttgtccacatatagtgcacacatcaagcgtctgtgt
aaaattatggaacttggcacccgaaaatcacttgttttaattgatgaaattggaagtggt
actgatccttctgaaggaatggcactttcagcaagcatattacagcatcttgcctgtcac
gtgaatctgacagttgtaactacacattatgaagacttgactcgcctcaaggatgaggat
gatagatttgaaaatgctgctatggaatttgatattttggctttacttccaacctatcac
atactttggggtactactggtcagtccaatgccttagatattgcccagtcacttgaattt
gatcccaatattttgagtcgtgcacgagaatgggtgaagaaactgctgccagacaggcaa
caggaacgtcaaggtggactttttgaatctctctcaaaacagagatatgaacttcaggat
caagcaagaacagttgctgccattctctctgacgctacagaactatatcatgagcttctt
ggtgagacagaagatctcaatgaacgcgaagtggacttgaagctgatggaagtggatgct
gtgaacaaagagataactgaagcaaagtatcagattgatgaagccattgcaaagtttgag
aagaaaatatatggagaaaacacagatatatcagaattcatgagaaaaactcaagcagat
atagcttctatagtgggaaaatactgttcaactgctaaagaggtgttgaattcccagaca
aatactgttcagactaatttgcctattcccaagattggagatcaagttgttgttaaaaga
ttaggtagtaaattagccactgttgcagaaaccccttcaaaagatgatggcagtttattg
gtgcagctgggaagtatgaagtttcgtgttaaggctagtgatattgagaagattgtgagc
agcaaggaagctgatacaagtggctatgtatcagttaggcaaaagaagaggagaaatatc
aaaagtcaaaagaatgtcaggcagatctga
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