Cryptomeria japonica (Japanese cedar): 131032588
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Entry
131032588 CDS
T10556
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03440
Homologous recombination
cjf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131032588
03460 Fanconi anemia pathway
131032588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjf03032
]
131032588
03400 DNA repair and recombination proteins [BR:
cjf03400
]
131032588
Enzymes [BR:
cjf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131032588
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
131032588
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
131032588
Bloom's syndrome complex (BTR)
131032588
FA (Fanconi anemia) pathway
131032588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
DUF6088
Motif
Other DBs
NCBI-GeneID:
131032588
NCBI-ProteinID:
XP_057819589
LinkDB
All DBs
Position
2:291338084..291604886
Genome browser
AA seq
730 aa
AA seq
DB search
MKKALLPPSKARSISSGEYNKVDNSSKREWLLKLLQQHFGHSNFRGLQLEVIETILSGKD
CFCLMPTGGGKSLCYQIPAVARNGIVLVVSPLIALMENQVSFLKSKGIPAEYLSSTQKVA
TKEKIYEDIDSGKPMVRLLYVTPELIATNGFMTKLKKLHSRGLLHLIAIDEAHCISSWGH
DFRPSYRKLSTLRIFLPGVPILALTATAARKVQEDVIKSLCLHQPSLLQTSFNRPNIYYE
VRYKDLLKDVYTDLLEMLKKNKQDCAIIYCLARNTCDDIGSRLLRDGISCCVYHAGLSDK
VRSRALEEWASGNVPVVVATVAFGMGIDRKDVRTVCHYNIPKSMESFYQESGRAGRDQKP
SRSLLYYGMDDRRSMEFILNNSSQLKGNTKKPQDVMLKKSLGDFEKMVDYCEGSGCRRQK
ILMHFGEQVSSSLCSKTCDLCKYPDRISKELFELSDVSRSHGKNRLPSVIFDSSSSAIGR
GYEGVESEFWNRTDQISDPEEEISSSEDEASNFAAASVRGRSIANAHLDKRLDCLLRAEE
KYDAKQGFRTAKRELNNKKIVPENLRDAGRQRLGIAVQQALKRLGNENLDYQNVSIILED
QCYSKYGKLGRSFYNSQVASTVRWLTTSSTEAIQNRIEPDAVNNNKSRSSLPLNESDSLK
QTNSSLIQLETCNMEKKNELKQVSVKQELIGQKRTCPENDASCSIQNAEARKELPPIPSF
TNYANKRGKK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagcactattgccaccatcaaaagccaggtccatatcaagtggggaatataac
aaggttgataatagcagtaaacgagaatggttgttgaagctgttgcagcaacattttgga
cattccaactttagaggactacagcttgaggtcattgaaactattttatcaggcaaggat
tgcttttgtctcatgccaacaggaggtgggaagtcattatgctaccaaattcctgctgtt
gcacggaatggaattgtgcttgttgtgtccccattaatagcattgatggaaaaccaagtt
tcatttttgaagtctaaaggaattcctgcagagtatttatcctctacacaaaaagtggct
acgaaggagaagatctatgaagacattgattctggaaagcccatggtgcgattgctctat
gttacaccagagctaattgcaacaaacggatttatgacaaagctaaagaaacttcattca
cgaggcctgttgcatctcattgccatagatgaggcacattgtatttcatcttggggacac
gatttcagacccagttatcgcaagctttcaaccctgagaatttttcttcctggtgtacca
atattagcattaacagccacagctgctagaaaggttcaagaagatgttatcaagtcactg
tgtttgcatcaaccgtcacttcttcaaacatcatttaaccgtccaaatatttactatgaa
gtacgatacaaagatttgctgaaagatgtatacactgatttactggagatgctgaagaaa
aataaacaagactgtgcaattatttactgtcttgcacgtaatacttgtgatgatattggt
agccgtctcttgagagatggcatttcctgttgtgtgtatcatgcaggactgagtgataaa
gttcgtagtcgagcactagaggagtgggcatcaggaaatgttccagtcgtggtagcaaca
gtagcctttggtatgggaattgatcgaaaagatgtgcgaacagtatgccattataatatt
ccaaagtcaatggaatcattttatcaggagtcgggaagagcaggacgtgatcaaaaacca
tcgagaagtttactttactatggcatggatgatcgtagaagcatggaattcattctaaac
aactcttcacagctaaaagggaacactaagaagcctcaagatgtgatgctcaagaaatct
cttggtgattttgaaaagatggttgattattgtgaaggatctggttgccggagacagaaa
atactaatgcattttggagagcaggtatcttcgtctctttgtagtaaaacatgtgattta
tgcaaataccctgatcgaatatctaaggagctgttcgagctttcagatgtatctaggagt
catgggaagaacagacttccctcagttatatttgacagtagttctagtgcaattggaagg
ggatatgaaggtgttgaatcagaattttggaatcgcactgatcaaattagtgatccagaa
gaggagatctccagttcagaggatgaagcttccaattttgcagctgcttctgtaagaggt
cgaagcattgcaaatgcacacctagataaaagacttgactgtttgctacgtgctgaagaa
aagtatgacgctaaacaagggtttcgtacagcgaagagagagctcaataacaaaaagata
gttccagaaaatctaagggatgctgggagacagaggctgggaatagccgtacagcaagct
ctcaaacggctaggaaatgaaaatcttgattaccaaaatgtcagcataatattggaggat
caatgctacagtaagtatggaaaattgggaaggtcgttttacaactctcaagtagcaagc
acagtccgctggctcacaacctcaagcacggaggccattcagaatcgaatagaacctgat
gctgtaaataataataaatccagatcgtctttacctctgaatgaaagcgattctttaaag
caaacaaattcttctttaattcagctcgagacatgcaatatggagaaaaagaatgagctg
aagcaagtgagtgtcaaacaagagttaattggtcagaagagaacatgtcctgaaaatgat
gcttcctgttcgatacaaaatgcagaagcaagaaaagagcttcctccaataccatctttc
accaactatgcaaacaagcgaggtaaaaagtga
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