Cryptomeria japonica (Japanese cedar): 131033212
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Entry
131033212 CDS
T10556
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131033212
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131033212
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131033212
NCBI-ProteinID:
XP_057820355
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Position
6:complement(653573799..653576363)
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AA seq
411 aa
AA seq
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MGIRSFMNWVFLAGFLCAHAHVGATKLGNSSAVEEDADSVAEMVQRSIESKKRELGYLSC
GTGNPIDDCWRCDPNWERNRKRLADCGVGFGRNAVGGKNGRFYVVTSSGDDPVNPPPGTL
RHAVIQTEPLWIIFKTSMFIHLKEELIMNSFKTIDGRGANVHIAYGPCITIQYVTNIIIH
GVHVHDCKPGGNAMVRSSPTHYGWRTRSDGDAVSIFGGSHIWVDHCSLWNCADGLIDAVI
GSTAITISNNHFAHHNEVMLLGHSDSYTQDSTMQVTIAFNHFGAGLVQRMPRCRHGYFHV
VNNDYTHWEMYAIGGSANPTINSQGNRYLAPANPFAKEVTKHENCNGNECQGWNWRSEGD
LMLNGAFFTSSGAGASASYAKASSLGARPSSMVGPLTGNAGVLHCRARARC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgggcattaggagtttcatgaattgggtattcttagcagggtttctctgtgcccatgcc
catgtcggggcaacaaaacttgggaattcctctgctgtggaagaggatgcagatagtgta
gctgagatggttcagaggagcattgagagtaagaagcgagaactgggttatttgtcatgt
gggacgggcaatccgatcgatgactgctggcggtgtgatcccaactgggagcgcaaccga
aagaggctcgccgactgtggagtcggctttggcaggaatgcagtcggcggcaaaaatggc
cgcttttatgtggtcaccagttcgggtgatgaccctgtgaatccgcctccgggtactctg
cgccatgccgtcatccagactgaaccgctctggatcattttcaagacaagcatgttcatt
catctcaaggaggagctcatcatgaacagcttcaagacaattgacggccggggcgccaat
gtccacatcgcctatgggccctgcattaccattcagtatgtcactaacatcatcattcat
ggagttcacgttcatgactgcaaacctgggggtaatgcaatggtgagatcctcccccacc
cattacgggtggagaacaaggagtgatggtgatgcggtttccatctttggtggaagccac
atttgggtcgaccattgctcactgtggaactgcgctgatggtttgatcgatgccgtcatt
ggatccactgccattaccatttctaacaaccatttcgcccatcacaacgaggtgatgctg
ctgggtcacagtgactcttacactcaggactccactatgcaggtcaccattgccttcaac
cacttcggcgcaggtcttgtgcaacggatgccaaggtgccgacatgggtactttcatgtt
gtgaacaatgactacactcattgggaaatgtatgccattggaggcagtgctaaccccacc
atcaacagccaaggaaaccggtacctcgcaccggccaacccttttgctaaagaggtgacc
aaacatgaaaactgcaatggcaatgaatgtcaggggtggaactggagatcagaaggggat
ttgatgctgaatggggcctttttcacatcatcaggggcaggggcatcggccagctatgca
aaggcatcgagtctgggagcaaggccatcatcaatggtgggtcctctcactggaaacgca
ggcgtgctgcattgcagggctcgagctcgctgctga
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