Cryptomeria japonica (Japanese cedar): 131033762
Help
Entry
131033762 CDS
T10556
Name
(RefSeq) serine/arginine-rich splicing factor SR45
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03013
Nucleocytoplasmic transport
cjf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131033762
03015 mRNA surveillance pathway
131033762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131033762
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131033762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_10
Motif
Other DBs
NCBI-GeneID:
131033762
NCBI-ProteinID:
XP_057821021
LinkDB
All DBs
Position
3:658836544..658858368
Genome browser
AA seq
433 aa
AA seq
DB search
MARSGRPRPATPSGSISRSSSYTSSSSASGSRSRSRSRSASFSSSSVSRSDSSRSRSPPP
PEKRSTSSARRDRTPPVPPKKASPVRKSPPPPESVVLHVANLTRNVNEGHLKEIFCNFGD
VVNVELSMDRSVQLPKGYGYVEFKARADAEKALLYMDGGQIDGNVVSARFTLPQRTKAST
PPKAVATAPPKREHGTREPVGPGVEKDDLVHQREASPLRRKASPPHRRSPIVRRVESPPR
RRAESPPRRRVESPPRRRGESPLRRRVDSPLRRRRDSPPRRRDSPPRRRDSPPRRRPSSP
PRRRSRSPIRISPRRVRGSPVSRKRSPISRRRSPPPRRGRTPPRRSPPHRRSRSPVRRPI
RSQSRSLSPPHRVRGPTRRRGRSDSSSSESPSPRKRSPRGSRKASRSRSPKRLARGRSVS
NTSSSSSPSPSKN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcgagatcagggcggcctagacctgcaactccttcgggctcaatatcacggtcttct
tcgtatacttcttcttcttcagcctcgggctcacgctcacgctctcggtcccgttcggca
tcgttttcttcgtcgtctgtgtctcgcagtgatagttcccggagccgcagcccaccccca
cccgagaaaaggtcaacatcatcagcaaggagagaccggacaccaccagtgccacctaaa
aaggcatcgccagtcaggaaatctccaccaccccctgagtcagtagttcttcatgttgca
aatttgacccgaaatgtgaatgaaggtcatctgaaggaaattttctgtaactttggcgat
gtagtaaatgtggaactgtcaatggatcgaagtgttcagctgcccaagggatatggatat
gttgagtttaaagcaagagctgatgcagaaaaggctttgttgtacatggacggaggacag
attgatggtaatgttgttagtgcacgttttacacttcctcaacgtacaaaagcatccaca
cccccaaaggctgttgcaacagcccctcctaaaagagaacatggaacaagggagcctgtt
ggtcctggtgtagaaaaggatgatttagtgcatcagagagaagcttctccactacgaaga
aaagcatccccaccacacagacgatctccaatagtgcgccgtgttgaatctccccctcgt
cgtcgtgctgaatctcctcctcgccgtcgtgttgagtcaccacctcgtcgtcgaggagag
tcgcctttgcggcgtcgggttgattcaccacttcgaagacggagggattctcctcctcgg
cgaagggattctccacctcggcgaagagattctcctcctcggcgtcgtccgtcctctcca
cctcgcaggcgttctcgatcaccaattagaatatctcctaggagggttagaggaagccca
gttagccgcaagcgttcaccaatttctcgacgacgctcacctccacccagacgtggtcgt
actcctccacgtaggtctcctcctcatcgtcgcagtcggtctcctgttcgtaggcctata
cgatctcaatcaagatcattgtctccacctcacagggtgcgagggcccactcgaagacga
ggaaggtctgattcttcatcatcggagtccccgagcccaagaaagcgttcacctcgtgga
agcaggaaagcttcaagaagtcgaagtcctaaaaggcttgcaagaggaagaagtgttagt
aatactagtagcagtagctccccctctccatctaaaaattag
DBGET
integrated database retrieval system
