Cryptomeria japonica (Japanese cedar): 131034002
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Entry
131034002 CDS
T10556
Name
(RefSeq) protein SHORT ROOT IN SALT MEDIUM 1 isoform X1
KO
K25827
cell division cycle and apoptosis regulator protein 1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjf03021
]
131034002
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
131034002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBC1
LAIKA
BURAN
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
131034002
NCBI-ProteinID:
XP_057821307
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All DBs
Position
2:complement(671355812..671398688)
Genome browser
AA seq
1428 aa
AA seq
DB search
MDQWNYARAAQQAAHQGYSTQQAPATSVAGSAYAQQSYGQQQTYGQQAAGGYAGSASLGS
GTGLQHASLQHTSQRANSARGGQADSGAYSAGASAVTGGGTASGALQYGGQYGSVYGASG
QSSVQQVTGASTKGGAASAFPVYGAGASRAAGSFAGGSAGVNASVVHGLDSSKYISSGSA
AVYGSVKANDYDSLSPHGYSQKADQYAGSGGYGAKAAEYLSSDRGQYGQSQSVYIGRDLQ
TDAARRYPDSGGVGHPRQSDLQDQALLLRQTQVLQAQQLQSVGSLRQGSATSLDAGGRPA
DYLPGRGSTMHPVTQEYGAPMRDLLGGSYGSRLDSDVALLGSRGAGSAASVLGGSGGRGL
DDLYGQGSPRTGYGVSLPPGRDYSSGKGPVGVSSWDAGYTGSSASRMDRPSRFDDIRDDR
VLLRHEYDRREEEIHREREREREHERERERELERRDRERERDRERERERERERDRERELR
RRERTPIRPPLRVRREPSFTRKEERVARRPSPRREPLHRHASPAKDRRREYICRIDPYSL
VEAERDFASISKRYSRLYVAPDFSKLVVNWLKEELNVSYNTPVSFEHDAIIEDENDPKES
SPKSSDKVAGVAKQLKGSTVWNAKVILMSGISENAMSELVSENITEDKVLHVHNVLRFAI
LRKDHSFFAAGGSWDNVLDGGDPATDESALIRTAIRCFKGATQLDLTSCKHWSRFVEVHY
ERIGKDGLPSHREITVIFLPDISTCLPSFESWKAQYVEQKNIRLEREREAASRREKKEKS
TDKKDGIKGNSKADKESKSADKNKKEKDGKKEKEKNTKDERKEEKKDDKEEKKIENIEIE
NKEEEKKEKEEKKEEKKEKEEKKVDKKDSEGKKVEKKDSDAKKVEKEQKKVEKKKDDKKE
SEGKKVEKKEPEGKKVEKKESDTKKVEKKKEDEKKIEKKKDEEKQSDKTKDKNKEEKKVA
KEENIDGKDREERKEEKLDKHDGAQDMDDSDKVKKKDEKKSESKDKDAKEIDSKGKPLKE
KKDKEKSDEVPPYPGFFLTTKWTKKSKIRSMTLSLDGLLDYNEKDSEESTFELSLFAEVF
QEMIQYQMGSRILASIEALRKVSGLKRKDDRKRPREEKSEKGEGQGTLTQKRSKFSDKPT
DGNSKDDIGLKSDKDHKNEKNKNGENDEMKGRNDNKEKIGEKTEDKADNTDKEVENNDQK
VSEKADKMDVDEDKVVEEGQGQRQEEEEGGEEVEEEEEEGEDEEEAEGEDEEEEEGDEEE
EEEEENNENVEGTEAEATKPLPNGKSSPSCQDMEETKIDTGKKDSNKDVQETDVEMKDAS
QKDASHEGKAEDKNEKDVKPDVRVKKAIDKELLKAYRYFDRNRAGYIKVDDLRRLLHNLG
KFLSHKNVKELVSCALFESNKAPRDERIIYPNLLKKGDLLIMPDKTCT
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtggaactatgcgagggctgcccaacaagccgcgcaccaggggtattcaaca
caacaagctccagccacatctgttgcaggctctgcatatgctcaacagtcatatgggcag
cagcagacgtatgggcaacaggctgcaggtggatatgctggcagtgcatctctaggttct
ggtacaggattgcagcatgcttcactacaacatacatcccaacgtgctaattcagcacga
ggtggacaggcagattctggtgcatattctgcaggagcatctgctgttactggtggtgga
actgcctcaggtgcgcttcagtatggagggcagtatggatctgtttatggagcttcaggt
caaagtagcgtacaacaggtaactggagctagtacaaagggtggtgctgcatctgcattt
ccagtgtatggtgctggtgccagtcgggctgctggatcatttgctggaggttcagcaggt
gtcaatgcttctgtagtccatggattagattcttcaaagtatatatccagtgggtcagct
gcagtttatgggagtgttaaagctaatgattatgactccttatcaccacatggatacagt
caaaaagctgatcagtatgctggtagtggtgggtatggtgcaaaggctgctgagtattta
tcttcggacaggggacagtatggtcagagccagagtgtgtacattggaagagacttgcag
acagatgcagccaggcggtatccagattcaggtggtgttgggcatcctcgacaatcagac
ttacaagatcaggcactattgcttcgccagacacaagttttgcaagcacagcaactgcaa
tctgttggttcattgagacagggttctgctacatcccttgatgcgggtggaaggcctgca
gattatcttccaggaaggggcagtactatgcaccctgtaacacaggaatatggagcccca
atgagggacctgttaggtggctcttatggttcaaggctcgattcagatgtggccttacta
ggttcccgtggtgctggcagtgctgcttctgtgcttggaggcagtggagggagaggtctt
gatgatttatatggtcaaggctctccacgcacaggttatggtgtcagtttacctcctgga
cgagattatagctctggaaaagggcctgttggtgtttcttcttgggatgcagggtatact
gggagtagtgcaagtcggatggatcgtccaagtcgttttgatgatatccgagatgataga
gtcttactccgacatgagtatgataggagggaagaagaaattcatagagagcgtgagagg
gagagagaacatgaaagggagagagaacgtgagttggaacgacgtgatcgggaacgggaa
cgtgatcgggaacgagaacgtgagagagaacgggaacgcgacagggaacgagaacttagg
aggagggaacggacccccattagacctcctctaagggttcgtagagagccatcttttaca
aggaaagaagaaagagttgctaggcgaccttcccctcgccgtgagccattgcatagacat
gcatcacctgccaaagatcgaaggcgagagtatatttgcaggattgatccgtacagtctt
gttgaggcagaaagggactttgcatcaatcagtaaacgctattcaaggctttatgtagcc
ccagatttttcaaagcttgttgtcaattggttaaaggaggagctcaatgtctcttataac
acaccagtcagcttcgagcatgatgccataatagaggatgagaacgacccaaaggagtct
tcaccaaagtcatctgacaaagtagcaggagttgcgaagcaattgaagggaagcactgtt
tggaatgcaaaggtcattctaatgagtggaataagcgagaatgctatgtcagaactagtt
tctgaaaatattactgaagataaagttctccatgtccataatgttttaagatttgctatt
cttcggaaggaccacagtttttttgcagctggaggttcatgggacaatgttttagatggc
ggggatccagctactgatgaatctgctttaattcggacggctataagatgcttcaaggga
gccacccaacttgatctgaccagttgcaagcattggagtcgttttgttgaggtgcactat
gagagaataggtaaagatggccttccaagccacagagaaattacagttatttttcttcca
gatatatctacatgccttccatcatttgagagttggaaagctcagtatgttgaacagaaa
aacataaggcttgagagggaacgtgaggctgcttccagaagggaaaagaaagagaagtcc
actgataagaaggatggcatcaaagggaactccaaagcagataaggaaagcaaatcagca
gacaaaaataagaaagaaaaagatggcaagaaagagaaagaaaagaacacaaaagatgag
aggaaggaggaaaagaaggatgacaaggaggaaaagaaaattgaaaacatagaaatagag
aataaagaggaggagaagaaagaaaaggaagagaagaaagaagagaagaaagaaaaagag
gagaagaaagtagataagaaggattctgaagggaagaaagttgagaaaaaggattctgat
gcaaagaaagtagaaaaggagcagaagaaagtagagaaaaagaaagatgataagaaggaa
tctgaggggaagaaagttgagaagaaagaacctgagggaaagaaagttgaaaagaaagaa
tctgacacgaagaaagttgaaaaaaagaaagaggatgaaaagaaaattgagaagaagaaa
gacgaagagaagcaaagtgataaaacaaaagacaagaacaaggaggaaaagaaagttgca
aaggaggagaatattgatgggaaggacagggaagaaaggaaagaagagaagttggataag
catgatggtgctcaggacatggatgacagtgacaaggtgaagaagaaagatgagaaaaag
tcagagagtaaagacaaagatgcaaaggaaattgattccaaaggaaaacctttgaaagaa
aaaaaggataaagaaaagtcagacgaggttccgccttatccaggattttttcttacgacg
aaatggaccaagaaatccaagattcgctcaatgacattatcactggatggccttttggat
tacaatgaaaaggactctgaagaaagtacatttgagctgtctctgtttgctgaagttttt
caagaaatgatccaatatcaaatgggaagtcggatattggcatctatagaagcattgcga
aaagtgtcaggtttgaagagaaaggatgaccggaagaggcctcgggaggagaaatcagag
aaaggtgaggggcaaggaacattgacacagaaacgttcaaagttttctgataaaccaaca
gatggtaattcaaaagatgatatcggtctcaagtctgataaagatcataaaaatgagaaa
aataagaatggtgagaatgatgagatgaagggaaggaatgataataaggagaaaattggt
gagaagacagaagacaaagctgataatacagataaggaagttgagaataatgatcagaag
gtttctgaaaaggcagataagatggatgtggatgaagacaaagttgtagaagagggacag
gggcagaggcaggaggaagaggagggaggagaggaagtagaggaagaggaagaagaagga
gaagatgaagaagaggcagaaggggaagatgaagaagaggaggaaggggatgaagaggag
gaagaagaggaggagaataatgagaatgtggaaggtactgaggcagaagcaaccaaaccg
ttgccaaatgggaagagttcaccatcttgtcaagatatggaagaaacaaaaattgataca
ggcaagaaggattcaaacaaggatgtgcaagaaactgatgtagaaatgaaagatgcatcg
caaaaggatgcaagtcatgagggaaaagctgaagataagaatgagaaggatgtaaagcca
gatgttcgtgttaaaaaagcaattgacaaggagttgctaaaggcgtatcgctacttcgat
agaaatagagctggttacattaaggttgatgatttgcgaaggcttctacataatttgggg
aaattcctatcccacaaaaatgtcaaggaacttgtgtcatgtgcactatttgagagtaac
aaagcaccgcgcgatgaaaggatcatttacccaaatttattgaagaaaggggacttatta
atcatgccagataaaacatgtacttag
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