Cryptomeria japonica (Japanese cedar): 131034020
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Entry
131034020 CDS
T10556
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin 2
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131034020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjf03009
]
131034020
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
131034020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltr_RsmB-F
PCMT
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
131034020
NCBI-ProteinID:
XP_057821341
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All DBs
Position
2:complement(668223681..668229113)
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AA seq
310 aa
AA seq
DB search
MRPPRGGGRGGFRGGRGSDGGGRGGGRFGGGGRGGFGGRGGGGGRGGDRGRGRGGGRGGR
GGGMKGGAKVVIEPHRHEGVFIAKAKEDALVTKNMVSGESVYGEKRISVQNEDGTKTEYR
VWNPFRSKLAAAILGGVDNIWIKPGTHVLYLGAASGTTVSHVSDIVGPTGIVYAVEFSHR
SGRDLVNMAKKRTNIIPIIEDARHPTRYRMLVGMVDVIFADVAQPDQARIVALNAHHFLK
NGGHFVISIKANCIDSTVPAEAVFAQEVKKLQKEQFKPSEQVTLEPFERDHACVVGGYRV
PKKQKATAAA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgccaagaggaggtgggcgcggaggtttcaggggcggacgtggcagtgatggt
gggggaagaggcggtgggcgctttggtggcggaggaaggggcggttttggtggcagagga
ggaggaggaggccgcggaggtgaccgtggcagaggtagaggcggtggtcgtggcggaaga
ggaggcgggatgaagggcggcgcgaaggtggtgatcgaaccccatcgtcacgagggggtt
tttattgccaaggccaaggaagatgcactcgtcacgaagaatatggtttcgggagaaagc
gtctacggagaaaagcgaatcagtgtccaaaatgaagatggaaccaagacagaatacaga
gtatggaatccatttcgttcaaagttggctgctgccattcttggtggtgttgataacatc
tggatcaaaccaggaacacatgtactatatctaggggctgcttctggaacaaccgtatct
catgtttcagatattgtaggcccaactggcattgtgtatgcagttgaattttcacacaga
agtggacgagatttagtaaacatggcaaagaaacggacaaatatcatacctattattgaa
gatgctcggcatcctactcgttataggatgcttgttggtatggttgatgttatttttgct
gatgttgcccagccagaccaggcacgtattgttgcattgaatgcacatcatttcttgaaa
aatggagggcattttgtaatatctatcaaggcaaactgcattgactctactgttccagca
gaggcagtgtttgcccaggaagtcaagaagttgcagaaggagcagttcaaaccatccgag
caggtgacgctagaaccttttgaaagagatcatgcttgtgttgtaggtggatatagggta
ccgaagaagcaaaaagcaacagctgctgcttaa
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