Cryptomeria japonica (Japanese cedar): 131034297
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Entry
131034297 CDS
T10556
Name
(RefSeq) plant-specific TFIIB-related protein PTF2 isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
Transcription machinery [BR:
cjf03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
131034297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131034297
NCBI-ProteinID:
XP_057821784
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Position
11:complement(509382020..509465827)
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AA seq
645 aa
AA seq
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MEETLQCDRCGEKAVTTDVITGIVVCESCGCVKEDSAFTAAWDAATGEGFGNFVSATDTG
ARASRLYSTRRNGRWVHSAGEYDYHERKQAIALKKLMEFTSLLRLPAERVNEVKYMVEKL
TQGQWGAGRWFEILIGACIYVIVRQSHLPLTIIEVAVIINCNVSELGRMYNRVLKFLDIK
LPDVDLFIFLERVITSFSLFSDVDLEKTSKMLKHGRFLLQCAFQWFLTTGRHSLPIVAAI
LAFIAEVNEVNVGLEDISKELNVPMHTCKLRYKEIQESLVRVGQSLPWGKDITTKTVVRH
AFFLLQYMEIKANAKSRGKESISKDKECPKRARIGTDKTVSLSFEVKLSPIRPCTTSKDL
AIEKHSMLSLEKAQYGMHVDMTGNPQMDEQHSRPCLRTGDTNDTSMFKDTFESKLSAKSL
ASIYGQFLQELPLTREKVLTNEDNIKRRQQNIMVQSQGCEHNTLVKYPGRSTLPQEKISM
QQLLNTQEDSDALPPSFVASVEARARRCDKINAAKLRINEVKKSISKYLCWKDNAGQSYE
EQIKDKLRQTSALSLLSKKRKRKNEKSGIDWEDYIIECLLLHEADENQIEDGHYSALLDL
HVFKSDEVISDDDLQQYFRSKGEVALMSMLQKDGNAYPWISMAGL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggaagagacattgcaatgtgacaggtgcggagagaaagcagtgacaacggatgtcatt
acggggattgtggtttgtgagtcgtgtgggtgtgtaaaggaagattcagctttcacggcg
gcgtgggacgccgcaacaggagaaggcttcggaaattttgtgtccgctacagacaccggc
gcccgcgcttcccgtctttattcaaccaggcgtaatggccgctgggttcacagcgccgga
gaatacgattatcatgaaaggaaacaagcgattgctttgaagaaattgatggagttcaca
tcattattgagattacctgcagaaagagtgaatgaggttaaatatatggtggaaaagctc
acacaggggcaatggggtgcaggaagatggtttgaaattctaattggtgcttgtatctat
gtgattgttcgacaaagtcatcttcctttgacaataatagaggttgcggtcatcattaat
tgtaatgtcagtgaactggggcgaatgtacaacagagtgctcaagtttttagatatcaaa
ttgccagatgtggatttattcattttcttggagcgagtaattacttccttctcactattt
tctgatgttgatcttgaaaagacaagtaaaatgttgaaacatggacgattcctattgcag
tgtgcttttcagtggtttttgacaacaggacgtcactcccttccaatagtggctgctata
ttggcatttattgctgaggttaatgaggtcaatgttggacttgaagacatttctaaagaa
ttaaatgtcccaatgcacacttgcaagctacgatacaaagaaattcaggagtccttagtt
cgagttgggcagagcttaccttgggggaaggatatcacaacaaaaactgttgtaaggcat
gcattctttctgttgcagtatatggagataaaggcgaatgcaaaatccagggggaaggaa
agcatttctaaggataaagaatgcccaaagagggcaagaattgggactgacaaaactgta
tcactttcttttgaagtcaaattgtcaccaattcggccttgtacaacatccaaggattta
gctatagaaaaacattcaatgttgagcttggaaaaggcacaatatggaatgcatgtagac
atgactggcaatcctcaaatggatgagcaacactcacggccatgcttacgtactggtgat
acaaatgacactagtatgttcaaagatacatttgaatctaaattgtcagcaaagtcctta
gctagtatttatggtcagtttctacaagaacttcctttgacacgagaaaaagtgcttacc
aatgaagataatatcaagaggaggcagcaaaatattatggtacagagtcaaggatgtgag
cataataccctagtcaaatatcctggtagatctactcttccacaggaaaagatttcaatg
cagcagcttttgaatacacaagaagattcggatgccctgccaccatcttttgtggcgagt
gtagaggcccgtgcaaggagatgtgataaaataaatgctgccaagttacgcataaatgaa
gtgaagaagtcaattagcaaatatttgtgttggaaggataatgctggacaaagttatgaa
gaacaaataaaagataaattgagacaaacaagtgctttgtcattattatcaaagaaaaga
aaaaggaagaatgagaaaagtgggattgattgggaagactacataatagagtgtcttctc
ctccatgaggcagatgagaatcaaattgaagatggccactatagtgctctgctagatctg
catgtattcaaatcggatgaagttatatctgatgatgatctgcagcagtatttccgtagt
aaaggagaggttgctttgatgtccatgcttcaaaaggatgggaatgcttatccatggata
agtatggctgggctttga
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