Cryptomeria japonica (Japanese cedar): 131034555
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Entry
131034555 CDS
T10556
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131034555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjf03041
]
131034555
Spliceosome [BR:
cjf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
131034555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Exo5
Motif
Other DBs
NCBI-GeneID:
131034555
NCBI-ProteinID:
XP_057822049
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All DBs
Position
5:complement(547524336..547554828)
Genome browser
AA seq
494 aa
AA seq
DB search
MGIIFVLDLEATLADSFLADLEDLSDNDVPLSDHENDDAGEEAEDVDDEMADIETLNYDD
LDSVSKLQKTQRYIDIMQKIEEALQKGYDIPSSGIVLEDEPEYQLIVDCNALSVDIENEI
VIIHNFIRDRYRLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAIIMVVSV
TASTTSGKPLSEENLQKTLDACDRALTLDVAKKKVLDFVESRMGYIAPNLSAIVGSAVAA
KLMGTAGGLSSLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPSLRI
RACRLLAAKSTLAARVDSSRADLTGKAGRNLREEIRKKIEKWQEPPPAKQPKPLPVPDSE
PKKKRGGRRLRKFKERYAVTDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRV
SVGQNKFSAKVAKRFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHGVYLGSGTQST
YFSETGTFSKIKRT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcatttttgtgctggatcttgaggccactcttgcagattcatttttggctgat
cttgaagacttatccgacaatgatgtgccacttagtgaccatgagaatgatgatgcaggg
gaggaggccgaagatgttgatgatgagatggctgatattgaaactcttaattatgatgat
ctggatagtgtttcaaagctacagaagacgcaacgttatattgatattatgcaaaaaatt
gaagaagctttgcaaaagggatatgatattccaagtagtgggatagtgttagaagatgaa
ccagagtatcagctgattgttgattgtaatgctttgtcagttgatattgagaacgaaatt
gttatcattcacaacttcattcgggaccgttacaggttgaagtttcctgagttagaatct
ctcgtacaccatccaattgattatgcccgagttgtaaagaaaattggaaatgagattgac
ctaaccctggttgatcttgagggtcttttaccttctgcaattattatggttgtttctgtc
acagcatctactactagtgggaagcctctgtcagaggaaaaccttcagaaaacattggat
gcttgtgacagagctcttactcttgatgtggcaaaaaagaaggttttggattttgtggag
agtaggatgggatacatcgcccccaatttgtctgccattgtgggtagtgcagtagcagca
aaactgatgggcacagctggaggtctctcttcattggctaaaatgcctgcttgtaatgtg
caactactaggtgcaaagaaaaagaatttggcaggattttccacagcaacttctcaattc
cgtgtaggttatcttgaacaaacagagattttccaaagcacgccaccttctttaagaata
cgtgcatgtcgattattggctgcaaagtccacactcgcagctcgagtagattcatcaaga
gctgacctcactggaaaagctggtcgaaatctacgagaggaaatacgtaagaaaattgag
aagtggcaggaaccacctcctgcaaaacaacctaagcctctgccagttccagactctgaa
cccaagaagaagcgaggtgggcgaaggctgcgtaaatttaaagaaagatatgctgtaaca
gacatgcgaaagcttgcaaataggatgcaatttggtatacctgaagaaagctctttagga
gatggtttgggagaaggatatggtatgctagggcaggctggaagtgggaaactacgagta
tcagttgggcaaaacaagttttcagctaaagtggccaaaagatttaaggagaagaattat
ggaagcagcggtgcaacttcaggtttaacatcaagtctggcattcacgcctgttcaggga
attgaactaacaaatccacaggcacatggagtctaccttggaagtggcacacagagtacc
tacttttcggaaacgggaaccttttcaaagatcaaaaggacatag
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