Cryptomeria japonica (Japanese cedar): 131034648
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Entry
131034648 CDS
T10556
Name
(RefSeq) RNA-binding motif protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131034648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjf03041
]
131034648
Spliceosome [BR:
cjf03041
]
Complex A
U1 snRNP components
U1 related factors
131034648
Complex B
131034648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
131034648
NCBI-ProteinID:
XP_057822190
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All DBs
Position
5:904572184..904590094
Genome browser
AA seq
1058 aa
AA seq
DB search
MSVAMAVSPSSSSLEAAATKQQQEMSGVEPGTSQSQPQVHTMPTPPQASNSNDNSNNNSN
SNSNNNNVFAAAATPPPPGLPPYTASQIPPPQVAPVSFYRPVVQTPPPPLHPPGVSSGHA
LQQQQTPNPNSNLGFGQQAPSGNTNLGFGQQAPSVNTNVGFGQQAPGPNSNMSTNPNLGF
GQQPASTITPPAVRPPGLFPVSAPQYQQPRPFGHPPNGFSSAPMPLPGPPGAPSVQQPQM
MNPAVLGSAPAGMPRYSAPYPPLVRPTFAPRPPGGMGVMPLPRPPMQGARAMPQVLKYPL
PVSGTDPLKGALPLLATAEKPQTTVYVGKIAPSVENDFLLSLLELCGTIKSWKRAQDPTN
GTPKGFGFCEFESAEGVLRALRLLNKFCLEGQELVLNVNQATRDYLERYVEKKTEREKQI
KAAELQDADKEEETAPGVEKKEPPKPPPVDSQNKDNGDSEDQDSGKKFGIVNDADRQADE
NAMLKLKTMLEERSRLRPLPPPPPLPTSTDGPGKSVSASEATGRSKDADSDVEIMKSDVA
DDKNEEDTTSENKPTSEHEKPETSSSDKGRRYDRNRERDRERDLKREKERELERYERERE
RERLRREREREMRIREAERLYEEREREWEAREREKERQRQYEREREKDRERERRREIKDQ
EDASDDEDWRKRRHRSSIYEEKRKRRQREREEDLSDQYREEQEIAEAKKHKYEDTRQDME
DTKVLVRVHSDAHESAGMCVDVVKGDQKDSPMEQGYGSESGEENNQASRNGNASISGDEV
AMEQTLGTESRQNSSAPIRKLGFGLIGSGKRAAVPSVFHEEDDEDMHKDKKMRPLVPIDY
SAEEMQAVSANHSSGTASNLAAAAEFAKRISTLGSKEERVESERERSRKQSDRSGQKERE
SNRSDDRNRSKEENNDRSRDRDRNREKHHEREHNVEKSRAPENNKLLDVRQLIDTIPKTK
EELFAYNIDWAIYDKHNLHERMRPWISKKITEFLGEEEPTLVDFVVLNTKKHESAAHMLE
LLESILDDEAEMFVLKMWRMLIFEIKKVETGLASKSKA
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgccatggccgtttctccatcgtcttcttcactggaggctgcggccacaaaa
cagcagcaggagatgtcgggagttgaaccagggacctctcagtcacaaccacaggtacac
acgatgccaacgccaccgcaggcgagtaatagcaatgataatagcaataacaatagcaac
agcaacagcaacaacaataatgtctttgcggcggctgccacgccaccacctcctggttta
ccaccgtacaccgcttcacaaattccgccaccacaggtggcacctgtttcattctatagg
ccggtggttcaaaccccgccgccgccactgcatccaccgggtgtgtcctctggacatgcc
ctgcagcagcagcagacgccaaaccctaattctaatctagggtttggacagcaggcgccg
agtggtaacactaatttagggtttggacagcaggcgccgagtgttaacactaatgtaggg
tttggacagcaggcgccaggtcctaattcgaacatgagcactaatcctaatctagggttc
gggcagcagcctgcttccacaattacgcctccggctgttcgtccgccaggattgtttccc
gtatcggcaccgcagtaccagcagcctcggccgttcggtcatccgcctaatggtttcagc
agtgcgcccatgccgctgcccgggccaccaggcgcgccttctgtccagcagccgcagatg
atgaatcctgcagtgctgggatctgcacctgcaggcatgcccaggtattctgctccatat
ccccctttggtgcggcctacgtttgcaccacgtccacctggaggtatgggcgtgatgcct
ctgccgcgacctcccatgcaaggagctcgtgctatgccacaagtcctgaagtatcctctt
ccagtctcgggcacagatcctttgaaaggcgctttacctttactcgcaactgcagagaaa
ccacaaacaacagtttatgttggaaagattgcaccaagtgtggaaaatgattttttattg
tctctgcttgagttatgtgggacgatcaaaagctggaagcgtgctcaagatccaacaaat
ggtaccccaaaaggatttggcttttgtgaatttgagtctgcggaaggggtgcttcgtgcc
ttacgccttttgaacaagttttgtcttgagggacaagaattagtgttgaatgttaatcaa
gcaacccgtgattatctagagcgatatgttgaaaagaaaactgaaagggaaaagcaaatc
aaagccgcagaacttcaggatgctgacaaagaggaagaaactgcaccaggagttgagaag
aaagaacccccaaaacctccaccagtagatagccaaaacaaagacaatggtgattctgaa
gatcaggatagtgggaaaaagtttggtattgtcaatgatgctgatcgacaagctgatgag
aatgcaatgctgaagctgaaaactatgcttgaagagagatcaaggctccggccccttcca
ccgcctccaccccttcctacgtccacagatggtcctggaaaatctgtttctgcatctgag
gctactggaagatccaaggatgcagattctgatgttgaaatcatgaagagtgatgttgca
gatgacaaaaatgaagaagacacaacaagtgaaaataaaccaacctctgagcatgaaaag
cctgagacaagttcatccgataaagggaggcgttacgatagaaacagagagagagataga
gagagagatttaaaacgtgagaaggaacgggaattggagagatatgaaagggagcgtgaa
agagagagactgcgtagggaaagggaacgtgaaatgaggatacgtgaagcagagcgcctt
tatgaagaacgtgaaagggaatgggaagccagagagagagagaaggaacggcagaggcaa
tatgaaagagaaagggagaaggacagagagagagagcggaggagggagatcaaagaccag
gaggatgccagtgatgatgaggattggaggaaaaggcgtcacagaagtagcatttatgaa
gaaaaaagaaaaagaagacaaagagagagagaggaagacttatctgaccaatatagagaa
gaacaagagattgcagaggcaaagaagcacaaatatgaagatacgcggcaagatatggag
gacacaaaagtattggtacgggtacattctgatgcacatgaatctgcagggatgtgtgta
gatgtagttaagggtgatcaaaaagatagtccaatggagcaaggttatgggagtgaatct
ggcgaagaaaataaccaggcatcacggaatggaaatgctagtatatcaggagatgaagtt
gctatggaacagacacttggcacagaatccaggcagaatagtagtgcacctattagaaag
ctaggctttggacttataggatcaggaaagcgagctgcagttccatctgtttttcatgag
gaggatgatgaagacatgcacaaagataagaagatgcgaccgttggtacctattgattat
tctgcagaggaaatgcaagcagtgtcagcaaatcattcatctggaacagcctcaaatctc
gcagcagcagcagagtttgcaaagcgtatctctactttgggtagtaaagaggagcgggtt
gagtctgaaagggaaagaagcagaaaacaaagtgatagatcaggccagaaggaaagagaa
agtaaccgcagtgatgataggaatcgcagcaaggaagaaaacaatgatagaagtcgagat
agggacaggaatcgtgagaaacatcatgagagagagcacaatgtggagaaatcaagagca
ccggaaaacaataaacttttggatgtgaggcaattaattgacactattccaaaaaccaag
gaggagctatttgcttacaacattgactgggctatatatgacaagcacaatctacatgag
agaatgagaccatggatctcaaagaagataacagagtttctaggtgaggaggaaccaaca
ctggtggattttgttgttttaaacaccaagaagcatgaaagtgcagcccatatgctagag
cttttggaatcaatattggatgatgaagcagaaatgttcgtattgaaaatgtggagaatg
ctgatctttgaaataaaaaaggttgagacagggcttgcttccaagtcaaaggcctga
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