Cryptomeria japonica (Japanese cedar): 131034658
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Entry
131034658 CDS
T10556
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
KO
K11087
small nuclear ribonucleoprotein D1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131034658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjf03041
]
131034658
03032 DNA replication proteins [BR:
cjf03032
]
131034658
Spliceosome [BR:
cjf03041
]
Complex A
U1 snRNP components
Sm proteins
131034658
U2 snRNP components
131034658
Complex B
U1 snRNP components
131034658
U4/U6.U5 tri-snRNP components
131034658
Complex C
U2 snRNP components
131034658
DNA replication proteins [BR:
cjf03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
131034658
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
WHD_ArnR1
Gemin7
EBNA2_Core
BPL_C
LptD_N
Motif
Other DBs
NCBI-GeneID:
131034658
NCBI-ProteinID:
XP_057822213
LinkDB
All DBs
Position
5
Genome browser
AA seq
114 aa
AA seq
DB search
MKLVRFLMKLNNETVNIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKAPVTLDHLSV
RGNNIRYYILPDSLNLEALLVEDTPRIKPKKAAAGKPIGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgtccggtttctgatgaagttgaacaacgaaacagttaacattgaactcaag
aatggaactgtagtccatgggaccattacgggggttgacataagcatgaacacacacttg
aagacagtgaaactaacgctgaaggggaaagctcctgtaacacttgaccatctcagtgtc
aggggaaataatattcggtactatattttgcctgatagcttgaacctggaagcactgctg
gtggaagatacaccaagaatcaagccaaagaaggcagctgctggcaaacctattggtcgt
gggcgtggacgaggaaggggccgtggccgtggtcgtgggcggtaa
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integrated database retrieval system
