Cryptomeria japonica (Japanese cedar): 131034795
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Entry
131034795 CDS
T10556
Name
(RefSeq) SNW/SKI-interacting protein A
KO
K06063
SNW domain-containing protein 1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131034795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjf03041
]
131034795
Spliceosome [BR:
cjf03041
]
Complex B
Other components
Prp19-related factors
131034795
Complex C
131034795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
131034795
NCBI-ProteinID:
XP_057822377
LinkDB
All DBs
Position
3:346073919..346076223
Genome browser
AA seq
607 aa
AA seq
DB search
MEATLLGSLPAPKSSGATKYDFSSDPWFKNRVEESKPAVNTKTKQIPPYGKRAGFVPRKA
EDFGDGGAFPEIHVAQYPLDMGRKEEKKDTKILPVSVDAQGNIAFDAIVKQNENASKIVY
SQHRDLVPKIESEISNTENKEDEEREIEETTLRTKAALEKIVNVRLSAAQPKNVQQQSST
ATHIKYTPSQQSAEFNSGAKERIIKLVEMPKDPLEPPKFKHKRVPKASGSPPVPVMHSPP
RPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLCEALYVA
EQKAREAVEMRSKIQRELMMKEKEKKEQELRALAQRARMERSGATAAAASGVVGDKSIGV
VSGKTGEVPPLKEVVEPDRDRSVKESKEEREERLKREALREERRKERERERRLEAKDGHL
SKKSKITRDRDRDVSEKIALGMANTGGNAANGGEVMYDQRLFNQEKGMESGFATDDQYNI
YDKGLFTAHNTLSTLYRPKKDADSEVYGGADEQLDKVLKTDRFRPDKGFAGATERGGPRD
RPVEFEKDAEEADPFGLDQFLTEVKKGKKAMDKIGGGGTMKASAGSGMKESYEGGSSRSR
IDFQRGR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaactctgttagggagccttccggccccaaaatcctctggcgcgacaaagtat
gatttttcatccgatccatggtttaaaaatcgggtggaagagtccaagcctgctgtaaac
acaaaaactaaacaaatccctccttatggaaaaagggctggatttgttccacgcaaggcc
gaagattttggggatggcggcgcgtttcctgaaatccacgtcgcgcaataccctctcgat
atggggcgaaaggaagaaaagaaggacaccaagattctgccggtttcagtcgacgcgcaa
ggcaacattgccttcgatgcgatcgtcaaacagaacgaaaatgcctcgaaaatcgtgtat
tcacagcacagggatctggtgccgaagatcgagagtgaaattagcaatacagaaaacaaa
gaggatgaagaaagggaaatagaagaaacgaccctaagaacaaaggcggcgcttgagaaa
attgtaaacgtccgccttagcgcggcgcagccgaagaatgttcagcaacagtcgtctacg
gctacgcatataaaatacacgccttcgcagcagtcggcggagtttaattctggtgcaaag
gaaaggataattaaattggtggagatgcctaaagacccactggagccgcccaagtttaag
cataagagggttcccaaggcgtcggggtcgccccctgtgcctgttatgcactcgcccccc
cgccctgtgactgtcaaggaccagcaggactggaaaattccgccctgtatttccaattgg
aagaaccccaagggttatactattccacttgataagcgccttgccgccgatggcagaggc
cttcaggaggttcagattaatgacaacttcgccaaattgtgtgaggctttgtatgtggcg
gagcagaaggcaagagaggccgtggagatgaggtccaagattcagagggagttgatgatg
aaggagaaggagaagaaggagcaggaattgagggcccttgcacagagagctaggatggag
cgaagcggtgccactgctgctgccgcttctggtgttgttggtgacaaaagtattggcgtt
gtttctggtaaaactggcgaagtacctccattgaaggaggtagtggagcctgatcgggat
aggtcagtaaaggaaagtaaagaggaaagagaagaacggcttaagagggaggctcttagg
gaagagaggaggaaggagagggaaagggagagaaggttggaagccaaagatggtcaccta
tcaaagaagagcaagattacgagggacagggaccgagatgtcagtgagaagattgctctt
ggaatggccaacacaggaggaaatgctgcaaatggtggggaagttatgtatgaccaaagg
ctctttaaccaggagaagggtatggagtctggctttgcaacggatgatcaatacaatatc
tatgataagggtctgtttacagcgcataacactctctctactttgtataggccaaagaag
gatgctgattctgaagtgtacggaggggcggatgagcagcttgataaggtgcttaagact
gatcggttcaggcctgataagggatttgctggtgctactgagagaggtgggccaagggac
aggcctgtggagtttgagaaggatgcagaagaagcagatccttttggtttggatcagttc
ttgacagaggtgaagaaagggaagaaagcaatggacaaaattggaggtggaggaactatg
aaggcaagtgctggatctggaatgaaggaaagttatgaaggagggtccagcaggagtcga
attgactttcagaggggtcgttga
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