Cryptomeria japonica (Japanese cedar): 131034947
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Entry
131034947 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131034947 isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjf03400
]
131034947
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
131034947
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
131034947
NCBI-ProteinID:
XP_057822540
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All DBs
Position
8:464297446..464312401
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AA seq
1182 aa
AA seq
DB search
MEKVGKQLSGQDWELMIDDFQSGSQQKWLSQYPGLAILELALYTVVKKDYNFPLKSQLIT
FVEENADALIADADADEGLGSVVEALKAIVQAPADGVMVTFALKEQMMVAATSVMIVTDS
LHRAMHHLEALVELLLGVINRPNHGVDRQSRAIACECLRQLEKAYPCLLYAYAGHLLLLC
QSERTHAAQGYILLLTMVINNLACHMYNSSGRASMLATSILSTSVPWVPFNVPPFLAASA
PGEEKASIPCRELAPINRKEFHRVVAFLLERPQILTACGMLEFVSDLINVASALELQPSL
LKVQFSGLIYSYDPVLCHIVLMIYAHFVDAFDGEDKNICRRLVLISKEASQPLIVRLLVI
HWMLGLESLSLQKNRRSTLVSIASDLYPPVFDPLSLKAIKLDALAYCAINFDPTPTERLH
LPTNRPLDFSVSERGNTSVAVGEVTAGKLFNDGLACVSSFRWLPPWSTETRLAFRMLHRF
LTVAIPHPSIDEETISLYTKSALFDTLQSLLVNTALELQKLVPNILSLIDRLLYCESHQL
LGECLLQIFNGYLLSKLVPDRHLSAYFPIFDRIAESSSIPPRHLLELLTLYAGTLVNKYD
PETLSMSWSRGSKVLGICRTVLMHHHSSRVFLVLSRLLAFLCRFFPDLEIRDSARIYLRM
LICIPGNKLRRILSLGDQLPDDSSAPQLSSFFRSPSPRAPQSVMQNLSTYIHLSRVTPLI
VKQSWSLVIVNSDINEEIYSVGEQNVNLEEPSMAIAESKEGTDREHVAMDGVFRGVEPLR
VMDSKVSEMLGILRRHFATIPDVRHGPGLKVSVHCKLSFDSEGRFPAGQDDSFHNPQLNS
DDSWPALYAIVIKFSSGSQYGPIPSVHIPFLMGEPPRKNEPHFSSKSEEEKSILMQVQDG
SIIEPGKEADSQQPANNNKRATRSSSMDEDKEGFQELVIIELEPKEPVPALIDVFIEATG
EAGQSIRGQLQSIPVGIEDLFMKSPVPNDVQEEEVADYYFILFNVLWEACESPGKIGRET
FLLGGSKGVAAIHGTGSVKLLEAQSDRVIDSVGHFLGPSVVAVSGEQLINIVKDNNIVKD
VVWKDEKSHSSDEEISNSPGHNLSQEGPLQLKYLLDATDIDDSIEISKTHIGCFFILIFL
PPRFHLLLKMEVSEFSTLVRIRTDHWPCLAYVDEFLEALSIR
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggtgggaaagcagctttccgggcaggattgggagctgatgatcgatgatttt
caatctgggtctcagcaaaaatggctgtctcaatacccaggccttgcaattcttgaactt
gcactttacacagtggtgaagaaagattataatttccccttgaaatcccagcttattaca
tttgtcgaagagaatgccgatgctcttattgcggatgctgatgcagacgagggtttgggc
agcgtggttgaggctctcaaggctattgttcaggctcctgctgatggcgttatggttaca
tttgctctgaaagagcaaatgatggtagcagctacatcagtaatgattgtcacagacagc
cttcatagagctatgcatcatcttgaggcactggttgagctcttgcttggtgtaataaac
aggcccaatcacggagttgatcgacaatccagggcaatagcttgtgaatgcttgagacaa
ttggagaaggcttacccttgcttgctttatgcatatgcagggcatttgttgctcttgtgc
cagagtgagaggactcatgccgcccagggctatattctactcctcacaatggttatcaac
aatcttgcttgccatatgtataattcttcaggaagggcttccatgctggcaacatcgatt
ttgtccacatcagtaccatgggttcctttcaatgttcctccctttctggctgcctctgca
cctggggaagagaaagcatcaattccttgtagagaactggcccctattaatcggaaagag
tttcacagggtagtggcatttttactagagcgtccccagattttgacagcttgtggaatg
ctggaatttgtctcagaccttataaatgttgcatctgccttagagctccaaccttcactc
ttgaaggtgcaattctcaggtctgatatattcatatgatcctgtactttgtcacattgtt
ttgatgatatacgcccactttgttgatgcatttgatggagaagacaaaaacatctgcaga
cgcttagtgctaatatctaaagaagcatcgcaacctctcattgttcgtctacttgttatt
cactggatgttaggactggaaagcctttccttacagaagaatagaagatctacattggtc
tctatagcttctgacttatacccaccagtttttgatccactttcactgaaagcgataaaa
ttagatgctcttgcatattgtgcaatcaattttgatcccactccgacagagcgattgcat
cttcctaccaacaggccacttgacttttcagtctcagaaagaggcaatacttctgttgca
gtgggagaagtaactgcaggaaaacttttcaatgatggccttgcttgtgtttcatctttc
cgatggttgcctccatggagcacggagacaagattagccttccgcatgctacacagattc
ttgacagttgcaattcctcatccttcaattgatgaagaaactattagcttatacacaaag
tctgccctctttgacacattgcagagtctactggtgaatacggcattggagcttcagaag
ttagttcccaatatcctttctcttatagaccggcttctgtattgtgagtctcatcagctc
ttgggggagtgtcttctccaaatattcaatgggtatttgctgtcaaagctggttccagat
cgtcacttgtctgcatactttccaatatttgatagaattgctgagagtagttctattcct
cctcgccatttgttggaattattaacattgtatgctggaactcttgtaaataaatatgac
ccagaaactctatcaatgtcatggtctcgaggaagtaaagtgcttggaatttgtaggact
gtactcatgcatcaccatagttccagggtttttcttgtcctatctcgtcttctggctttt
ctttgtcgcttttttccagatttggagattcgtgacagtgcaaggatttatctacgaatg
cttatttgcattcctggcaacaaactcagacgtatattaagccttggagatcagctacct
gatgattcttctgctccacaactctcttctttttttcgcagtccatctccaagggcacca
cagagtgtcatgcaaaatttgtctacttacattcatctttctagagtcactcctcttatt
gttaaacagtcatggtctctggttattgtcaattcagatataaatgaagaaatatattcc
gtaggtgaacaaaatgtgaatctggaagaaccatcaatggctattgcagagtcaaaggaa
gggactgatagagaacatgttgccatggatggagttttcagaggggtggagcctttgcgg
gttatggattcaaaggtatctgagatgttaggaattttacgaaggcactttgccactatt
ccagatgttcgccatgggccaggcctgaaggtcagtgtacactgcaaacttagctttgat
tcagaaggaaggtttccagcagggcaggatgattcttttcacaatccacagttgaatagt
gatgattcatggcctgcactttatgctattgttattaaattttcttctggtagccaatat
ggaccgataccatctgttcacattccttttcttatgggtgagcctccaagaaagaatgag
ccacatttttcaagtaaatctgaagaggaaaaatcgatattgatgcaagtgcaagatgga
tctattatagaaccaggtaaagaagcagatagtcaacaacctgcaaacaataataaaaga
gccacaaggagtagctctatggatgaagacaaagagggcttccaagagttagtgataatt
gaattagaacctaaagaaccagtgcctgcacttattgatgtttttattgaggcaactggg
gaggctgggcagagtattcgtggtcaacttcaaagcattccagttggtatagaagacctc
tttatgaaatctccagttccaaatgatgtccaagaggaagaagttgcagactattacttc
attctgtttaatgtattgtgggaagcctgtgagagtccagggaagattggccgagagaca
ttcctacttggaggtagcaaaggagttgctgcaattcacggaaccggatctgtcaagctt
ttagaagctcaatcagaccgtgtaatagactctgtgggacactttttaggtccttctgtt
gtggctgtaagtggtgaacaacttatcaatattgtaaaggataacaacattgttaaggat
gttgtctggaaggatgaaaagtcacattcttctgatgaagaaatatctaattcaccagga
cataacctcagtcaagaaggtcctcttcagctaaagtacttactggatgctactgatatt
gatgattccattgaaatttctaagacacatattggttgtttcttcattcttattttcctg
ccccctcgcttccacttactattaaagatggaggtatctgagttctcaaccttggtacgg
atcaggacagatcattggccatgtcttgcatatgtggatgagtttctggaagctttatcc
ataagatga
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