Cryptomeria japonica (Japanese cedar): 131035256
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Entry
131035256 CDS
T10556
Name
(RefSeq) chromatin-remodeling ATPase INO80-like
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131035256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjf03036
]
131035256
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
131035256
INO80 complex (yeast)
131035256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
131035256
NCBI-ProteinID:
XP_057822905
LinkDB
All DBs
Position
2:520232241..520237039
Genome browser
AA seq
1504 aa
AA seq
DB search
MAPQPLFVYSCSKLFNLEALKSFKLPDFEDFNVNENRPDENNERQGGANVPTDRQPSKLP
IIGDAKEYFRVDQSTYSSSNPTDTGNDDTDSEKTMSDTDSEIKIIPDTGIDNTDSERIVT
DTESDDSDSERSITDDEYRVSEEDYQLMLIQHMKKRQKMAAASARNTRRIEPCTVSQVGS
STQLLEMGNGIVFKIPPTYDILAQSMNLPTLSDVRIDGGLDFRCLNAMLAAERRATNRNA
GCSIMYPSLQDSLNRALRASNSAPFNLKVVDSDNVEATMMQAFESDHVEAPAMPVTQSPV
VPERPAMYPSLQDSLNRALRASNSAPFNLKVVDSDNVEAAMMQAFESDHVEAPAMPVTQS
PVVPERPAMYPSLQDSLNRALRASNSAPLNLKVVDSDNVEATMMQAFESDHVEAPTMPVT
QSPIVPERPAIPETDQLQHLSSGMKALNQVNFPIRSIEHQPPKRQQLMLQKVSPIENADM
EIRSFWRKVVRKDISKHHRHYMWLHRKNQSTAKRLAEGCQKEVKNRSTRSLRLMKSAATR
TKKLAKDMLIFYKRFDKEQVENRKKQEKEEAEALKREEAAMEEKRQQRGLNFLLAKSKMY
AHFMQPNQGDEASTSNANLTEGEDREDAAMKEKALKTALDAASRQKEIINQFDDECERLR
ESRGSSSNMDLVNPSSMPCTSSVQTPNMLHATLTGYQLKGLQWLVNCYEMSVNGILADEM
GLGKTVQAISFLAHLAEEKNKWGPFLVVAPASVAPNWADEMAKFCPDLITFPYWGSERTV
LKKRINPKKLYRKDSNFHVLITNYQIVVKDEQYLKRVKWQYMILDEAQAIKSSNSERWKT
LMSFECRNRVLLTGTPIQNNMAELWALLHFIMPTLFNCQEQFKEWFSKDIESHAEHGSLL
NEHNLKKLHDVLKPFMLRRLKKDVIGEMPGKTELTINCKLSSRQQTFYHAIRNKVSIAEL
LDSNRLMNIVMQLRKVCNHPDLFERIEAHTTMYFGHIQSSLLPPPCGKLADIYYAGRHSP
ISYKIPKLVYRECTENLPVSSSGSPQCFQQKWLNNLLNVFSTENVHRSLFPVSENETESV
VRSGTFGFSRMVDLSPTEVAFLAKSSQVEKWLFSLTIDQYPNEMEEGKVRAVTKMLMMPP
RPADFSFLRSSPLGLSKALIVSLAYRFLRKARKYRPFHSFVPAVSAPPVDVVCSDRRFAY
QRMEELHHPWMKRLLVGFARTSEFNGPAKPDKPHYLIQEINSQLAAQQPLLELTQRTLGT
SPPLQSFGFAKMLTYSGKMQILDALLKRLRAENHRVLLFAQMTKMLDIIEDYMKYRKYKY
LRLDGSSTVTNRHEMVKEFQTNTDIFVFLLSTRAGGVGINLTAADTVIFYESDWNPTQDK
QAMDRSHRLGQTKEVTVYRLICKGTIEEKILQRASKKNTVQQLVMTGRQAKVDEIAAADV
ISLFTDDDTDSQLEQKIKDMGKDKLKKKTVRFVEDDVHIEEMEGDKGGEVGKVKTQRKKR
KDDV
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacaacctctatttgtgtattcatgtagcaagctttttaacttggaggctctg
aaaagttttaagctgccggattttgaagattttaatgtcaatgagaacagaccagatgag
aacaatgaaagacaaggtggtgccaatgtgcccactgacagacaaccatcaaaattacca
atcattggagatgcaaaggagtattttagagtagatcagtctacttacagttcatctaat
ccaacagatacaggaaatgatgatactgactcggagaaaactatgtcagatactgactct
gagatcaagatcataccagatactggtatagataacactgactctgagaggattgtaaca
gatactgaaagtgatgacagtgattctgagaggagcataacagatgatgaataccgagta
tcagaagaagattaccaacttatgctcatacagcatatgaagaaaagacagaaaatggct
gctgcttctgctagaaacacaagaagaattgaaccgtgtactgtttctcaagttggatct
tcaacccaattattagagatgggaaatggcattgtttttaaaatcccaccaacttatgat
attttggcacaatctatgaatttgcccactttatcagatgttcgaatagatggtggtttg
gatttcagatgtttaaatgccatgttggctgctgaaaggagggctacaaatcgaaatgca
ggatgttcaataatgtatccatctcttcaagacagtttaaatcgagcactacgagcttct
aattcagctcccttcaatctaaaagttgttgattctgataatgtggaggcaacaatgatg
caagcttttgagtctgatcatgttgaggccccagcaatgccagtgacacaaagcccagta
gtcccagagaggcctgcaatgtatccatctcttcaggacagtttaaatcgagcactaaga
gcttctaattcagctcccttcaatctaaaagttgttgattctgataatgtggaggcagca
atgatgcaagcttttgagtctgatcatgttgaggccccagcaatgccagtgacacaaagc
ccagtagtcccagagaggcctgcaatgtatccatctcttcaggacagtttaaatcgagca
ctacgagcttctaattcagctcccttaaatctaaaagttgttgattctgataatgtggag
gcaacaatgatgcaagcttttgagtctgatcatgttgaggccccaacaatgccagtgaca
caaagcccaatagtcccagagaggcctgcaattcctgaaacagatcaattgcaacatctt
agtagtggcatgaaagctttgaatcaggtaaatttccctattcgtagtattgaacaccag
ccacctaagaggcagcagctcatgttacaaaaagtctcacctatagaaaatgctgatatg
gaaattagaagtttctggcgaaaagttgtgagaaaggacatctccaagcaccacagacat
tacatgtggttgcatcgtaaaaatcagtcaactgctaagagacttgcagaaggttgtcaa
aaagaggttaagaatagatccacaaggtctctcagactgatgaagagtgcagccacgaga
accaaaaagttagctaaagatatgttgatattctataaaaggtttgacaaagaacaggtt
gaaaacaggaaaaagcaggagaaagaagaagcagaagccttgaagcgtgaggaagctgca
atggaagagaaaagacagcaacggggacttaatttcttactagccaaatcaaagatgtat
gctcattttatgcagccaaatcagggagatgaagcttctacttctaatgcaaatttaaca
gagggagaagacagagaagatgctgctatgaaggaaaaggccttgaaaactgccttggat
gctgccagtagacaaaaggaaatcataaaccaatttgatgatgaatgtgagaggcttcgt
gagtctaggggctctagtagtaacatggacctggttaacccatcttcaatgccttgtacc
tcatcagtgcaaacacccaatatgctccatgccacattgaccggataccaattgaagggt
cttcaatggcttgtaaactgttatgaaatgtcagtgaatggtatactggcagatgagatg
ggtttgggtaaaacagtccaagcaatatctttcttggctcatttggctgaggagaagaac
aaatggggaccctttctggttgttgcacctgcttctgttgcccctaattgggctgatgaa
atggccaagttctgccctgatttgataacatttccttactggggttcagaaaggacagtt
ttaaagaaaagaataaatccaaaaaagctttatagaaaggattcaaatttccatgtactt
atcacaaattaccagatcgttgtcaaagatgaacagtacttgaagcgagttaagtggcag
tatatgattttagatgaagctcaagcaattaaaagctcaaacagtgaaaggtggaaaact
ctaatgagttttgaatgtagaaatagagttttgcttacaggaactcctattcaaaataac
atggcagaactgtgggcactgttgcattttatcatgcctaccctgtttaattgtcaggag
cagttcaaggaatggttctcaaaagacattgagagccatgctgagcatggaagtctactc
aatgaacacaaccttaagaaactgcatgatgtcctcaagccttttatgttgaggagactt
aagaaagatgtgattggagaaatgcctggcaaaacagaattaacaatcaactgtaaactg
agttctagacagcagactttttatcacgctatcaggaataaggtctcaatagctgaatta
cttgatagcaatcgtctaatgaacattgttatgcagctaaggaaagtatgcaatcatcct
gacctctttgaaagaattgaagcacacacaacaatgtactttgggcatattcaaagctct
cttttgccacccccttgtggtaaattagctgatatatactatgctggaaggcacagtcct
atatcctacaagatccccaaactggtttacagagagtgtactgaaaacctgccagtgtcc
agctcaggatcgcctcagtgttttcagcagaaatggttaaacaacctgttgaatgtcttt
tctacagagaatgttcacagatcactgttccctgtgagcgagaatgaaacagaatctgtt
gttagaagtggcacatttgggttttctcgcatggttgatctctctccaactgaggttgca
tttctagccaaaagctcacaagtagagaagtggctattttctctaactatcgatcagtat
ccaaatgagatggaagaaggcaaagtaagagctgtaacaaaaatgttgatgatgccaccc
cggcctgctgatttttccttcttaagaagcagtcctcttggcctctcaaaggcattgatt
gtttcactagcataccgttttctcaggaaagctaggaagtatagaccttttcactctttt
gttcctgcagttagtgctcctcctgtggatgttgtatgctctgacagaagatttgcatat
cagagaatggaagaactccatcatccatggatgaaaaggttattggtgggctttgctcgg
acatctgaattcaatggtcctgcaaaaccagataaacctcattatctgattcaagaaata
aattcacaattggctgcccaacagccactgcttgagctgacccaaagaacacttggaact
tctcctcctctgcaaagctttggttttgcaaagatgcttacatactctggaaaaatgcag
attttagatgctttgctaaaaaggctacgtgctgaaaatcatcgtgtgctactttttgca
cagatgacaaaaatgcttgatatcattgaggactacatgaagtacagaaagtacaaatat
cttaggctagatgggtcttcaacagtgacaaaccgccatgaaatggtcaaggaattccaa
acaaatacagacatatttgtgtttttgttgagcacacgagctgggggtgtgggtatcaat
ctaacagctgcagatactgtcatattttatgagagtgattggaatccaacacaagataag
caggccatggacaggtcacacagacttggacagactaaggaggtcactgtgtatagactg
atttgtaaggggactattgaagaaaaaatcttgcagagagctagcaaaaagaatacagtt
cagcagcttgttatgactggtcgtcaagcaaaggttgatgaaattgctgcagctgatgtg
atttcattgtttacggatgatgatactgattctcagctggagcagaagattaaagacatg
ggcaaggataagctaaagaagaaaaccgtaaggtttgttgaagatgatgttcacattgaa
gagatggaaggagataaaggtggtgaggttgggaaagtaaagacacaacgtaagaaaaga
aaagatgatgtgtaa
DBGET
integrated database retrieval system
