Cryptomeria japonica (Japanese cedar): 131035296
Help
Entry
131035296 CDS
T10556
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131035296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131035296
NCBI-ProteinID:
XP_057822955
LinkDB
All DBs
Position
5:856101631..856103450
Genome browser
AA seq
364 aa
AA seq
DB search
MVFFFVSFQTSLSTSQYNVIDECWRSDPNWEHNRMKLADCAAGFGSRANGGKGGRIYTVT
SSDDNPANPEPGTLRHASTLRGAVWIIFARDMQIQLKLPLFVSSHTTIDGRGASVTISNG
ACIRVSNVRHIIIHGLTIHDCWESSPGHVLISKARGVVNIYQQDGDAISIESSRDVWIDH
NTLSHCADGLVDVTLGSAAITVSNNRFFSHNEVMLLGNSDSDLVDKHMRVTVAFNHFGPG
LMQRMPRARLGYVHVVNNYYEPWGIYAIGGTSNPTILSQANVFVAPDDYTKKQVTQHKDN
SYSSSVWRSKRDLFLKGAYFEQSGEGKKIPMYRRGERFRVEKAKFVPVLTKDAGALLCVR
NRPC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggttttcttttttgtttcctttcagacttccttgtcaacatcccaatacaatgtaatc
gatgagtgctggagaagcgatcccaattgggaacacaacagaatgaagcttgcagattgt
gctgcgggctttggaagccgagccaatggaggcaaaggaggaaggatttacactgtcaca
agctctgacgacaaccctgcaaatccagagcccgggacactgagacatgcatcaaccctt
cgtggggcagtgtggataatatttgccagggatatgcagatacaacttaagttgcccctg
tttgtttcaagccacacgacaattgatggaaggggtgcgagtgtcaccatcagtaacggg
gcctgcattcgtgtgtcgaatgtaaggcacattataattcatggattgaccatccatgac
tgttgggaaagctcccccggtcacgttctgatttcaaaagccagaggggtggtgaacata
taccaacaagatggtgatgcaatatctattgagagttccagggatgtttggattgatcat
aacactctgtctcattgtgcggatgggctggtagacgtgactcttggttcagccgccatc
actgtctctaacaaccggtttttcagtcataacgaggtgatgttattaggtaatagtgat
tcagatctagttgataaacacatgagggtgacagttgccttcaatcattttggacctgga
ctcatgcaacgaatgccaagagctagattaggatatgtacatgtagtgaataactactat
gaaccatggggaatatacgctattggaggaacttcgaatcccaccatcttgagccaagcg
aatgtgtttgttgctccagatgactatacaaagaagcaagtcacacagcacaaggacaat
tcatattcttctagcgtgtggagatccaagcgagatttatttttaaagggagcatacttt
gagcagtcaggtgaagggaaaaaaatcccaatgtatagaagaggagaaagatttcgagtt
gaaaaggccaaatttgtaccagttttgacgaaggatgcaggggctttattatgtgtacga
aataggccttgctag
DBGET
integrated database retrieval system
