Cryptomeria japonica (Japanese cedar): 131035297
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Entry
131035297 CDS
T10556
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131035297
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131035297
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
131035297
NCBI-ProteinID:
XP_057822956
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Position
5:856416954..856421209
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AA seq
365 aa
AA seq
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SLLVFLFAFFSCFVNYNAIDKCWRRDPNWANHRMSLANCAKGFGSYAMGGIGGGIYTVTR
DDDNAVNPLFGTLRYGVTRDQPLWIVFARDMEIHLQMPLFFASHKTIDARGAKVTISNGA
CITLYNTSNVIIHGLTIHDCQPTGSGDVLIYESKGVVRDYPMDGDGISVISSRDIWLDHN
TISHCSDGLIDVTLGSTAVTISNNRFFNHNEVMLLGNSDTYTPDLNMRVTVAFNHFGPDL
MQRMPRCRLGYVHVANNYYEPWGIYAIGGSSNPTILSEANWFVGPSDYTKKQVTHQNGCT
SGSPCVWRSIHDMFLEGSYFTQSGLGNAHPTYDQRQKFKIDIVYLVPKLTKNAGALDCFP
NKPCW
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
tctttgttggtctttttgtttgcttttttttcctgttttgtcaactacaatgccattgat
aagtgctggaggagagatccaaattgggcaaatcacaggatgagtcttgcaaactgtgca
aaaggctttggaagttatgccatgggaggcataggaggtggaatatatacagtcaccaga
gatgatgacaatgctgtaaatcctttgtttgggactctgagatatggtgttactcgcgat
caacctctgtggatagtttttgcaagggatatggagattcatcttcagatgcccttgttc
ttcgcaagccacaagactattgatgcaaggggagcaaaagtcaccattagcaatggggcc
tgcataacgctttataataccagcaatgttatcatccatggcttaaccattcatgactgt
caacctactggatctggagatgttctaatctatgagtccaaaggagtggtgagagattat
ccaatggatggcgatggtatatctgttataagttctagagatatttggcttgatcataat
accatttctcactgcagtgatggtctcatagatgtgacgcttggctcaacagcggttact
atttctaacaacagattctttaatcataatgaggtaatgttattaggaaacagtgataca
tatacacccgacttaaacatgagggttactgtggcattcaaccattttggaccagacctt
atgcaacgcatgccaaggtgtagattgggatatgtacatgtggcaaataactactatgag
ccttggggaatatatgcgattggaggaagctcaaatccgaccatcttgagtgaagcgaat
tggtttgtgggtccaagtgattataccaagaaacaagtgacacaccaaaatgggtgtact
agtggttcaccttgtgtttggagatcaatccatgatatgtttttagaaggatcatatttc
acacaatcaggtttgggaaatgcacatccaacatatgatcagagacaaaaatttaagatt
gacattgtctatttagtacctaaattgacaaagaatgccggggctctagattgttttccc
aacaaaccttgttggtga
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