Cryptomeria japonica (Japanese cedar): 131035471
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Entry
131035471 CDS
T10556
Name
(RefSeq) rhomboid-like protein 20 isoform X1
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131035471
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
131035471
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
DER1
RuvA_C
CUE
Motif
Other DBs
NCBI-GeneID:
131035471
NCBI-ProteinID:
XP_057823155
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All DBs
Position
10:272545708..272747933
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AA seq
297 aa
AA seq
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MNNGPSGFHNAPFTKGLVITCAIVSVLLGMHGGASACGLSYQAIVRKLHIWRLATSALVF
SSTPELVFGLYLLYYFRVFERQIGSNKYSVFVLFSIIFTTCFELIALVVFKDPTSSVLAS
GPYGLIFSSFIPFYFDIPVSTWFRIFGFRFSNKSFVYLAGLQLLLSSWRRTFVPGLCGIA
AGLSYRLNVFGIRRIKFPEQVACRISRLSLLSLPVEPSTVASRGNVTREAVPSYDRQFED
DFAAASPLLGSTVHPSEEAVSTLVTMGFDRNLATQALLQVDNDINAATNILIEMQSH
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaataacggaccctctggatttcacaatgctccgtttaccaagggtttggtcattacc
tgtgcgattgtttctgtcctacttggcatgcacggaggagcatccgcctgcggactttct
taccaggcaattgtgaggaaacttcatatttggaggttggccacatctgctcttgtgttt
tcttcgaccccagaattggtgtttggcctctaccttttgtattatttcagggtgtttgag
agacaaattggctcaaacaaatattcagtgtttgttttattctcaatcatattcacaaca
tgctttgaactgattgctttggtggtattcaaagatcctacttcaagtgtcctcgcatct
ggaccatatggcttgatattttcttcatttatacctttttactttgatataccagtttca
acatggtttcgcatttttggtttccggttctctaacaaatcatttgtctatcttgctggc
cttcagcttcttctttcatcatggagaaggacatttgtaccaggcctttgtggcattgct
gctggcttgtcatatcgtcttaatgtctttggcattcgtagaatcaagtttccagagcaa
gtagcatgtaggatttcccgcctttcattgctaagtttaccagttgaaccatcgactgtg
gcttcaagaggaaatgtaacgagggaagctgttccttcatatgatagacaatttgaggat
gactttgctgctgcatctccacttcttggttcaactgttcatccctcggaagaagctgtt
tcgacattggtgacaatgggttttgatagaaatcttgcaactcaagcacttcttcaggtc
gacaatgacatcaatgcagcaaccaatatactgattgagatgcagtcccattaa
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