Cryptomeria japonica (Japanese cedar): 131035519
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Entry
131035519 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131035519 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131035519
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131035519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131035519
NCBI-ProteinID:
XP_057823212
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Position
3:964693349..964804392
Genome browser
AA seq
942 aa
AA seq
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MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPREKAKSETRDWLNTMVGDLESQIDVFEADIEGLSVRKGKARPPRLTHLEESITRHKA
HIMKLELILRLLDNDELSPEQVNDVRDFVEDYVERNQDDFEDFADVDELYSSLPLDKVEG
LEDLVLNVPPSVVLKEKAVITPPTVVPSVNGTSLKVSLATSAPQGTSLSSPVTQQGNTSH
EQADDTTSQESISDVRPRTPPSSTVANAGGSVSSAASSVTALGPNVGLNPVLGVGSTTLT
RSLGSASASALLTGTGSNRSAAETTTAIPSSPIGLVTSAKEDDGSTFSSRRITSEVGLTR
GVGRGSVVSGVGTATTTLVPLNLSGTAHSGSGIVPDVAKRTGLTGDDRVGSSGLAQQLVS
PLTGQSRVYLQQVAKIPDGTMANDANSVSEGGLIGTRIFSPSSGGQWRPPSQTEMGQFRG
RAEIAPDQRENYLQRLQQVQQQGHNPGLLGAQLSHLAVANQKQFSSQQQSALLQQAQLQL
LQQQHQQQGPLLQNSQSPSLQQQQVGLGLGLQSQSISAANTVSQHQQVQSSAAQVLTATL
TSKENDVSSTKVESQQLQPPPQQQQKSVEDSHEAPTVNAGGYGRSFTSEDDLKNSYTFDV
PVAGPGSLAEFSQLSRDADLTPVQPVQPSLGHGVIGRRSNSDLGAIGDNLVGSIGNSGGA
HDHIYNLQMLDAAYHKLPQTKDSERLRSYVPRHAAVTPASYPQVQLPIFENPAFWEHLDT
DALFFAFYYQQTHSGLKTWQNTYQQYLAARELKKQSWRYHRKYNTWFQRHEEPKVTTDEY
EQGTYVYFDFNILHDDYQHGWCQRIKTEFTFEYAYLEDELVV
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccagccgaaaactccagggcgagatcgatagagtattgaaaaaagtgcaggaa
ggcgtcgacgtttttgacagtatttggaataaggtgtatgatacggaaaatgcaaatcag
aaggagaaatttgaggcagatctgaagaaggaaattaagaagttgcaaagatatagagac
cagattaagacatggatacagtcaagtgaaattaaggacaaaaaggttagtgcgtcttat
gagcaggctctgctagacgcacgcaaacttattgagcgtgaaatggaacggtttaagatt
tgtgaaaaagaaacaaaaacaaaggcattctcaaaagaaggcttaggtcaacaaccaaaa
actgacccaagagaaaaagcaaagtcagagacaagagattggctgaacaccatggttggt
gacttagaatcacaaattgatgtttttgaagctgacattgagggtctctcagtgagaaag
ggaaaggctcgacctccaagattgacacatttagaagagtctattacacggcataaggct
catattatgaagctagaacttattttgagacttttggataatgatgaattgagccctgaa
caagtaaatgatgtgagagactttgtggaagactatgtggagcgtaatcaggatgatttt
gaagactttgcagatgtagatgaactttacagctcattgccattagataaggttgaggga
ttggaagatttagttttaaatgttcctccttcagttgttctcaaggaaaaggctgtcatt
actcctcctacagttgttccatcagtgaatggtacatctttgaaggtttctcttgccaca
tctgcacctcaaggaactagtttgtccagtcctgtgactcagcaaggaaatactagtcat
gaacaagctgatgatacaacttcccaagaaagtatttctgatgtaaggcctcgaacgcca
ccatcctcaacagttgctaatgcaggaggatcggtctcatcagcagcttcttctgtaact
gcattgggaccaaatgttggattgaatccagtgttgggtgttggaagcactacacttact
cgtagtttgggtagtgcaagtgcttctgcgttacttacaggaacagggtcaaatagaagt
gctgcagaaacaactactgctattccatcatcccctattggtctagttacttcagcaaaa
gaagatgatggcagtaccttctctagccgtagaataacatcggaggtaggattaacaagg
ggagtgggccggggttctgttgtgagtggagttggaactgctacaacaactttagtgcca
ctcaatttaagtggaactgctcattcaggaagtggaattgttcctgatgtggcaaagaga
acaggtctgacaggagatgatagggttggaagcagtggccttgcacaacagcttgtgtcc
cccttgacaggacagagtagagtatatctacaacaagttgccaagattcctgatggcacc
atggcaaacgatgcaaacagtgtttcagagggtggcctaataggtacacgaatatttagt
ccttcttctggtggtcagtggaggccccctagtcagacagaaatgggtcagtttcgtgga
agggctgagattgcaccagatcaaagggagaattatcttcagcgccttcagcaggttcag
cagcaaggacacaatccaggtctcttgggagctcaattatctcatttagcagtggccaac
caaaagcaattttcgtctcagcaacaatctgcacttttgcagcaggcacagttgcagtta
ttacagcaacaacatcaacaacaaggcccgttacttcaaaattctcaaagcccttccctt
cagcagcaacaagttggattaggtcttgggttgcagtcacaatccatttcagctgcaaac
actgtatctcaacaccagcaagtgcaatcgtctgctgcacaagttctaacagcaactttg
acatcaaaagaaaatgatgtttcatctaccaaggtggagagtcaacaacttcagccaccg
ccacagcagcagcagaaatcagtggaagattcacatgaagcaccaacagtcaatgctggt
ggatatgggaggagttttacaagcgaagacgacctaaagaattcttatacatttgatgtg
cctgttgcggggcctggttctttggcagagtttagtcaactttcaagagatgcagatctg
actccagtacaacctgtgcagccttcgcttggtcatggtgttataggacggagaagcaat
tctgaccttggtgctattggtgataatttggttggttcaattggtaattctggaggagca
catgatcacatttacaatctccagatgctcgatgcggcataccacaagcttcctcaaaca
aaagattcagaacgcttgaggagttatgtgccaagacatgctgcagtaacacctgcaagc
tatcctcaagttcaattgcctatatttgaaaatcctgccttttgggagcacttggacacg
gatgctctcttttttgctttttactaccagcagacacattctggcttgaaaacatggcag
aatacgtatcagcaatacttagcagcaagagaattgaagaaacagtcatggaggtaccat
aggaaatataatacatggttccagagacacgaggaaccaaaagttacaacagatgaatat
gaacagggcacgtatgtgtactttgacttcaacatactgcatgatgactaccaacatggc
tggtgtcagagaataaagacagaattcacatttgagtatgcatatcttgaagatgagctt
gttgtataa
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