Cryptomeria japonica (Japanese cedar): 131035554
Help
Entry
131035554 CDS
T10556
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131035554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131035554
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131035554
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
131035554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-Di19
zf-RING_6
DUF7567
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
131035554
NCBI-ProteinID:
XP_057823251
LinkDB
All DBs
Position
3:complement(953564222..953615380)
Genome browser
AA seq
328 aa
AA seq
DB search
MNCVGSRKRSSVPCMDVEVLESLSIADDEDDEEIQRPLVKNPSSNKNSNNNIVNSGNHHT
SALSAVVSPAASSVHELLECPVCTNSMYPPIHQCHNGHTLCSNCKSRVLNKCPTCRQELG
DIRCLALEKVAESLDLPCKYYNIGCPEIFPYYSKLKHESQCTFRPYNCPYAGSECSVTGD
VKSLVTHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFLL
GNAPVYMAFLRFMGDDNEAKNFSYSLEVGANGRKLIWQGVPRSIRDSHRKVRDSHDGLII
QRNMALFFSGGERKELKLRVTGRIWKEQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaattgcgtagggtcaagaaagagatcaagcgttccatgtatggatgtggaggttctt
gaatctctttcaattgcagatgatgaagacgatgaagaaatccagcggcctcttgttaaa
aatcccagtagcaacaaaaacagtaacaacaacattgttaacagtggcaatcatcacacc
agtgctcttagcgctgttgtttctcccgctgccagcagcgtccacgagctccttgagtgc
cctgtctgcactaattctatgtatccgcctattcaccagtgtcataatgggcatacgctt
tgttccaactgcaagtctagagttctcaacaaatgccctacttgcagacaagaacttggg
gacattaggtgcttagccttggaaaaggttgcagaatctctggatttaccttgcaagtat
tacaatattggatgcccagaaatttttccatactacagtaagcttaagcatgagagccaa
tgtactttcaggccatataattgcccctatgcaggatcagagtgttctgttacaggcgat
gttaaatccctagttacacatttaagagatgatcataaagtggacatgcactctggttgt
actttcaaccatcgatatgtaaaatcgaacccacgtgaagttgagaatgccacatggatg
ctgacagtcttcaattgttttggacagtatttctgtcttcattttgaagcttttctattg
ggaaatgcaccagtgtacatggcttttctgcgttttatgggagatgataatgaagcgaag
aatttcagctatagccttgaagttggggccaatggcagaaagctgatctggcaaggagtt
cccaggagtattagagatagtcatcgaaaagttcgtgatagccatgatgggttgatcatt
cagagaaacatggcattattcttttcaggaggagagaggaaagaattgaagttgagggtc
actgggcgaatctggaaagaacagtga
DBGET
integrated database retrieval system
