Cryptomeria japonica (Japanese cedar): 131035565
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Entry
131035565 CDS
T10556
Name
(RefSeq) auxin response factor 2B isoform X1
KO
K14486
auxin response factor
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131035565
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
131035565
NCBI-ProteinID:
XP_057823264
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All DBs
Position
3:970363759..970369994
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AA seq
854 aa
AA seq
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MSGYRDNNFRSSMTNFPPDGAGMGTESDDGGLYEELWHACAGPLVTVPRVGERVYYFPQG
HMEQVEASTNQGADRQMPLYNLPSKILCRVINVLLKAEPETDEVYAQITLVPEIEQHEAS
SEASPPNPPPKRNVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQQPPTQELVAK
DLHGIDWRFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGGNGELRVGVRRVMR
QQSNMPSSVISSHSMHLGVIATASHAVATHTMFTVYYKPRTSQSEFIIPYDKYMEAMNSN
LSVGMRFKMRFEGEEAPERRFTGTIIGMADIDPLRWATSDWRSLKVQWDETSAVPRPERV
SPWEIEPFVAPAAVNPQPVPTRKRPRTNVLPPSADMSMLGSCKTSVDPSIVLRYPRGLQC
QDPKALGETEVESSQKWGGPKLGDGLIDSGNAGSQKLPGSQNWMPLHKHESTYSEAFYGF
KGPSDVPFSNQNVENMHHGIPLRMFPGHENGTLDPSAIKLQLSTTWPIAFSNDLQGLSEA
DLKLTGTYLSSSNKSCGSGIYDALNGGNTHHSNFGGGDSSGSWFMPLIPPSQTEGSEEPS
SVNVSKGIAGNIQPTKLASQSGLPIWEVSKDKRGEPVSNCKLFGFQLIDNTAVDEINPST
ITAIVDDMQTANVSTVKQTQSVESDQVSEPTKTKYNMPTISSEQDKSLQKSVKETQARAQ
SNTTRSCTKVHKQGIALGRAVDLTKFEGYDELTCELEHMFNIEGELQDPSKGWQVVYTDN
EGDMMLVGDDPWQEFCSIVRKIFIYTKEEVEKMTPRKLHTKLQGCSDDEPLTRETSKYSD
HHESTAPTASSEKI
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggttacagagacaacaatttcaggagctccatgactaattttccgcctgatgga
gctggtatggggactgagagtgatgatggagggctatatgaggagctgtggcatgcctgt
gctggtcctcttgtgactgtacctcgtgttggtgaaagggtttattactttcctcagggt
catatggaacaggttgaagcatcgacaaatcagggtgccgatcgtcagatgcccctgtac
aatttgccttccaagatcctttgccgtgtcattaatgtgctattaaaggctgagccggag
acagatgaagtttatgcgcaaattactttggtcccagaaatagagcagcatgaggcttct
agcgaggcgagcccgcccaatccacctccaaagaggaatgtgcattcgttttgcaagacg
cttactgcctccgatactagcactcacggaggcttctcggttctcagaaggcatgctgat
gaatgccttccacctctggatatgagtcagcagcctcccacccaagagttggtggctaaa
gatctacatgggatcgattggcgttttagacatatttttcgaggtcagcctcgacgacat
ttgctaacaacaggatggagtgtctttgttagttctaaaagactggtggctggagatgct
ttcatatttttaaggggtggaaatggggaattaagggtaggggtaagacgtgtcatgagg
cagcagagcaatatgccatcatcagtcatatcgagccacagtatgcatcttggcgtcatt
gctacggcatctcatgctgttgcaacgcataccatgtttactgtttattacaagccaaga
acaagccagtctgagtttattattccttatgataaatatatggaggccatgaatagcaac
ctttcagttggtatgagatttaagatgagatttgaaggggaggaggccccagagcgaagg
tttactggaaccataattgggatggcggatattgatccactcaggtgggcaacttcagac
tggaggtctctcaaggtgcaatgggacgaaacttctgcagttcctcggccagagagggtc
tcaccctgggaaatagaaccatttgtagcacctgcagcagtgaaccctcaaccagtgcct
acaagaaagcgtccacgaacaaatgttttgcctccatctgcagacatgtcaatgcttggc
tcttgcaaaacttcagtggacccatcaatagtactccggtatcctcgaggattgcaatgc
caagatccaaaggccttgggagagacggaggttgaaagctctcagaagtggggtggtcca
aaactgggtgatggcctgatagacagtgggaatgctggctcccagaaattgcctggatct
caaaactggatgcctttacataaacatgaatcaacgtattccgaagctttttacggattt
aaaggtcccagcgatgtgccgttttcaaatcaaaatgttgaaaatatgcatcatggtatt
cctttgagaatgttcccgggtcatgaaaatggaacattggacccatctgcaataaaattg
cagttatcaaccacatggccaattgcattttccaatgatttacaggggttgagtgaggca
gatttaaaacttactggtacatatttgagttcatctaacaaatcttgtggatccgggata
tatgatgccttgaatggtggcaacacacatcattctaattttggaggtggagactcttca
gggagctggtttatgcctttaattcctccatcacaaacagaaggttcagaagaacctagc
tccgtgaatgtaagtaaaggtatagcaggaaatatacaacccactaaacttgcatcacaa
tctggccttcctatctgggaagtgtcaaaggataagagaggggaacctgtgagcaattgc
aaattgtttggttttcagttgattgacaatacagcagtggatgaaataaacccgtcaacc
atcacagctattgtggatgacatgcagactgcgaatgtctcaacagtaaaacagacacaa
tctgttgagtctgatcaggtatcagagccaacaaaaactaagtataatatgcctaccata
agttccgagcaagacaagtctttgcagaagtcagtgaaagaaacccaagcgagagcccaa
agcaacactacaaggagctgtacaaaggtacataagcaggggattgctcttgggagagct
gtggatctgacaaagtttgaaggttatgatgagctaacctgtgagcttgaacatatgttc
aatattgaaggagaactacaggatcccagcaagggttggcaggttgtttatacagataat
gagggggacatgatgcttgttggtgatgatccatggcaggagttctgtagcattgtccgc
aagattttcatctacacaaaagaagaggttgagaagatgactcctcgtaaattgcatacc
aagcttcaagggtgttctgatgacgaaccacttaccagagaaacatcaaaatattcagat
catcatgaatcaactgcacctaccgccagcagtgagaaaatttga
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