KEGG   Cryptomeria japonica (Japanese cedar): 131035581
Entry
131035581         CDS       T10556                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03020  RNA polymerase
cjf03420  Nucleotide excision repair
Brite
Transcription machinery [BR:cjf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     131035581
  RNA polymerase III system
   RNA polymerase III
     131035581
  RNA polymerase I system
   RNA polymerase I
     131035581
DNA repair and recombination proteins [BR:cjf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      131035581
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 Mrr_cat
Other DBs
NCBI-GeneID: 131035581
NCBI-ProteinID: XP_057823296
LinkDB
Position
5:357447466..357449245
AA seq 207 aa
MECAVGLTGEGRKLYRIRRTIMEMLKDRAYDVHDTEIHMSERDFINKFGENPTRRDFTIL
KSRRAVKDEIIVLFPEDEKLGMSTIKDYYSNLEKAKINRAVVVVKQSTSPMARKFVLNHT
KHNIEIFNETELLINISRHTLVPTHQILTSEEKRTLLDRYTLKETQLPRIQKSDAMARYL
GLVRGQIVKIIRPSETAGRYVTYRYVI
NT seq 624 nt   +upstreamnt  +downstreamnt
atggaatgtgcagttgggttaacaggggagggaagaaagctttacagaatccgccgcacg
ataatggaaatgctcaaagaccgggcttatgatgttcatgacactgaaattcatatgagc
gaaagagatttcattaataagtttggagaaaatccaacaaggagagacttcactattctc
aaatccaggagggctgtcaaagatgagataattgtactgttccctgaggacgaaaagctt
ggaatgtcgaccataaaagattactactcaaatctggaaaaggccaaaataaatcgggca
gttgttgtagttaagcagagcacttctcccatggccagaaaattcgttctgaatcatact
aaacataatatagaaatcttcaacgaaacagaattgctcattaacattagccggcataca
ttggttcccacacatcaaattctaaccagtgaagaaaagaggacattgttggatcgatac
acactaaaagaaacacagcttccacgaatacagaaaagtgatgcaatggctagatattta
gggttagtacgtggtcaaattgtaaagatcattcgacccagtgaaacagcaggaagatac
gtgacttatcgttatgttatttga

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