KEGG   Cryptomeria japonica (Japanese cedar): 131035737
Entry
131035737         CDS       T10556                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131035737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjf03019]
    131035737
   03041 Spliceosome [BR:cjf03041]
    131035737
Messenger RNA biogenesis [BR:cjf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     131035737
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     131035737
Spliceosome [BR:cjf03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    131035737
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 131035737
NCBI-ProteinID: XP_057823457
LinkDB
Position
3:complement(597526686..597530185)
AA seq 371 aa
MEGSKAEDNTQSSHSNDEENEETAAENPQEEKNNGSSKDSSNPGKIFIGGLSRETTTATF
TKYFSKYGELTDSVIMKDRATGNPRGFGFVTYADPSVVDKVIKDKHVIDGKTVEIKRTIP
RGNPPSKGPKTKKIFVGGIPTSITEDEFKNYFAKFGKVVEHQIMQDHGTGRSRGFGFVTF
DSEQVVDEILSHGKMYELGGKQVEIKKAEPKKPLPDSEPAYGMDGRPPFIPGGRGGYGDA
YGGLGGAYSSSYRGGAGFGGRPGVYGGYGVGDYSSAYGVYGGSTLGGFRGDSPAGYGGRF
GPYGSSFGSYGSGMLGGYGDSEGFGSYGSGSYGGGYDAGIGSGYGSAGAYGSGRGGGYGG
SSSGRYHPYSR
NT seq 1116 nt   +upstreamnt  +downstreamnt
atggaaggttccaaggcagaggataatacacagtccagtcacagcaatgacgaagaaaat
gaagaaactgctgcagagaacccacaagaggagaagaataatggctcttctaaagattct
tccaaccctggaaagatcttcattggtggtctatcaagagaaacaaccacagccacattt
acaaagtatttcagcaagtatggagagcttacagattcggtcattatgaaagaccgtgcc
acaggaaaccctaggggttttggttttgttacttatgcagatccctctgttgtagacaaa
gttattaaggataaacatgtaatagatggtaaaacggttgaaatcaagcgaacaatacca
agagggaacccaccatctaaaggtcccaaaaccaagaagatttttgtaggtggcattccc
acatcaattactgaagatgagttcaagaattattttgccaagtttggaaaggttgttgag
caccagataatgcaagatcatggtactggccgctcccggggctttggatttgttaccttt
gacagtgagcaggttgttgatgagattttatctcatgggaagatgtatgaattaggtgga
aagcaggtggaaattaagaaggctgagcccaagaaacccctccctgattctgagcctgca
tatggaatggatggtaggccaccctttataccaggtggccgtggtggctatggggatgct
tatggtggattaggtggcgcatacagtagttcttataggggaggagcaggttttggtggt
agaccgggagtttatggtggttatggagttggtgactacagtagtgcttatggagtttat
ggtggtagtaccctagggggtttccgtggtgattctcctgcaggctatggaggccgcttt
ggtccttatggtagcagctttggtagctatggaagtggaatgttaggtggttatggagat
tcagagggtttcggtagctatggtagcggtagttatggaggaggctatgacgcagggatt
gggagtggttatggcagtgcaggtgcttatggtagtggaaggggaggaggatatggtggt
agtagcagtggtagataccatccatattcaagatag

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