KEGG   Cryptomeria japonica (Japanese cedar): 131036329
Entry
131036329         CDS       T10556                                 
Name
(RefSeq) uncharacterized protein LOC131036329
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131036329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjf03019]
    131036329
   03041 Spliceosome [BR:cjf03041]
    131036329
Messenger RNA biogenesis [BR:cjf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     131036329
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     131036329
Spliceosome [BR:cjf03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    131036329
SSDB
Motif
Pfam: RRM_1 RRM_Nup35 Rad60-SLD_2 Allexi_40kDa
Other DBs
NCBI-GeneID: 131036329
NCBI-ProteinID: XP_057824168
LinkDB
Position
10:complement(818558303..818563020)
AA seq 585 aa
MESLLKKKKAEERTGAIAGEDEIENSDNDESEEEEKDEVKKLLKPFSADQVFDILCDAAM
KDAQLLHNIRKLADKNLPHKKVYIDGLHSTTTEETLYSIFSLYGELEECTVVMDDDLERS
EGCAFVTYKHLDGAERALKYPCKKIDSRRTLCRLASDEQEQAQVEAVAMSQKNVRRRKIL
VSNVPVYMSCLKLVNHFSLYGEIEEGQLGFDSKFGKLKAHVIFTYKNVEGAKKALEEPDK
NVYGHYMHCTRVAKKQKQKEDVQNIPLDRSGQAVTHGKGSIMGPDPVEVLQPEWFDDSEL
DMGLSNLATGASSSQLHAKSLQWDMGFPKLATGASSSQHHQKVVKWELDFPNLPTGAFSS
HHHAKALQKAIPLQAYLETQPIAALPGLNTYKHGLLAGIKYDSSSHAAQQGLNFYQTQQL
SQAAAPDLPDLNAPDHIYDTQVIKEGKNAYKNQQLSQAAVPDLPDLTVVSHVYDSQATKE
ENNASENQQLNQSTSNSPLEPIVYQIQELGLQAIHQTWQDQQPACPIQQPNAQAIHQTQQ
DQLPAYQIQPPTQLMLNEQTGQPPAPGLQKQHNQSQILFPRRSQQ
NT seq 1758 nt   +upstreamnt  +downstreamnt
atggaaagcttgttgaagaagaaaaaagcagaagagcgaacaggagcaattgcaggagaa
gatgaaattgaaaattctgacaatgatgaatctgaagaagaagaaaaagatgaggttaaa
aagctgttaaaacccttcagcgcagaccaggttttcgacattctctgcgacgccgccatg
aaagacgcgcagctcctgcacaacatacgaaaactggctgataaaaatctcccgcataaa
aaagtttacatcgatgggctgcattcaacaaccacggaagaaaccctatattcaattttt
tctctatacggcgagctcgaggagtgcacagtcgtaatggacgatgaccttgagagatct
gaaggttgcgcttttgtcacatacaagcacttggacggggcagagagagcgctcaagtac
ccttgcaagaaaattgatagccgaaggacactgtgccggctggcttctgatgaacaagaa
caagcacaagtggaagcggttgccatgtcgcaaaagaatgtcaggcgaagaaagattctt
gtaagtaatgtccctgtttatatgtcttgcctgaaacttgtaaatcatttttccctatat
ggtgaaatagaagaagggcagctagggtttgatagcaagtttggaaaattgaaagcccat
gttatttttacatataagaatgttgaaggagccaagaaggccctagaggaacctgataag
aatgtttacggacattatatgcattgtacgagagttgcaaagaagcagaagcaaaaagaa
gacgtccagaatattccattggaccgtagtggccaggctgttactcatggtaagggttca
attatggggcctgacccagttgaggttttgcaacccgaatggttcgatgattcagaattg
gacatgggtttatcaaatctagccacaggagcctctagctctcagcttcatgcaaaatct
ctgcaatgggacatgggtttcccaaagctagctacaggggcctctagttctcagcaccat
caaaaagttgtgaaatgggaattggatttcccaaatctacctacaggagcctttagctct
catcatcatgcaaaagctctgcagaaggcaattccattgcaagcatacctggaaacacag
ccaattgcagctctgccaggactgaatacctataaacatggattacttgcgggcattaaa
tatgatagcagttctcatgcagcacagcaaggactgaatttctatcaaacccagcaactg
agccaagctgcagcaccagatctaccggatctaaatgcacccgaccatatttatgatact
caagtaatcaaggaaggaaaaaatgcctataaaaaccagcaactcagtcaggctgcagta
ccagatctaccagatctaactgtagtcagccatgtttacgattctcaagcaacaaaggaa
gaaaacaatgccagtgaaaaccagcaattgaaccagtctacatcaaattctcctctggaa
ccaattgtctaccaaattcaggaactgggtctacaagctattcatcaaacttggcaggat
cagcagcctgcctgtccaattcagcaaccaaatgcacaggctattcatcaaactcagcag
gatcagctgcctgcctatcaaattcagccacccacccagctgatgctaaatgagcaaaca
ggccagcctccagcaccaggcctgcagaaacaacacaaccaaagccagatcttatttcca
agaagatcacagcaatga

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