KEGG   Cryptomeria japonica (Japanese cedar): 131036353
Entry
131036353         CDS       T10556                                 
Name
(RefSeq) UBP1-associated protein 2B
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131036353
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjf03019]
    131036353
   03041 Spliceosome [BR:cjf03041]
    131036353
Messenger RNA biogenesis [BR:cjf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     131036353
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     131036353
Spliceosome [BR:cjf03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    131036353
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35
Other DBs
NCBI-GeneID: 131036353
NCBI-ProteinID: XP_057824201
LinkDB
Position
10:818510192..818554508
AA seq 404 aa
MAKKRKVQEQASVKVEPQESEQNNNGDEGEGEITKLLEPFSKDQLIAILCEAAMKKPNTL
KSIRKLADKDLAHRKIFVHGLGWDATSDIVKASFAEHGEIEDCTVINDKATGKCKGYGFV
TFKHMDAAQRSLKEPTKKIGSRMVNCQMACTGPTPPQPVKDFVGRKIYVSPVPADVSADK
LLKHFVKYGEIEEGPLGFDKQSGKSKGYALFIYKTAEGARKALEEPNKTIDGHAMNCKRA
TENKKQKSNVPSLVTGPLDPNDLALTHGKGSILGSAAAAQGLLGGAFPFNQGFNAAFLAS
QNQNFGGLNTGLVGSINPSLVASLNPSSLGSGSGYGTHPSIGGYGAGEGSVNAGVHGLYG
SQAGALQGGLTGYQTSQLSQSAALPRTSQGGGSSLGGMPSYLPY
NT seq 1215 nt   +upstreamnt  +downstreamnt
atggcgaagaagcgaaaggttcaagagcaagcgtccgtaaaagtcgaaccacaagaaagt
gaacagaacaacaatggggacgagggggagggagaaattacaaagctgctggagcccttt
agcaaagatcagctcatcgccatactttgcgaggccgccatgaaaaaaccaaacacactg
aaaagcattcgaaagctcgcagacaaagacctcgcgcacaggaaaatctttgtccacggc
ctcggctgggacgccacatcggacatcgtgaaagcgtcctttgccgaacacggcgagatt
gaggactgcacagtcatcaacgacaaagccaccgggaaatgcaagggctacggcttcgtt
accttcaagcatatggacgccgcgcagaggtctttgaaggagcccaccaagaaaatcggc
agcaggatggtcaactgtcagatggcctgcaccggcccgacgccaccccagccagtgaag
gacttcgttggacggaaaatttatgtgagtcccgttcctgctgatgtaagtgctgataag
cttctgaagcattttgtaaagtatggggaaatagaagaagggccgctagggtttgataag
cagtccggaaaatcgaaagggtatgctctttttatttataagacagcggaaggtgccaga
aaggctctggaggagcccaacaagactattgatggccatgccatgaattgcaagcgagcc
accgagaataaaaagcagaagagtaatgtgccgtctttggttacagggcctctggaccct
aatgatcttgctttgacccacggtaagggttcgattctagggtctgccgcggcggcccag
ggtttattgggcggggcatttccgtttaatcagggattcaatgctgcctttttggctagt
caaaatcagaactttggtggcttgaacacggggcttgttggttccattaatccttccctg
gtggcttccttgaatccgtcttcgctgggctctggcagtggttatggaacccacccgagc
attgggggttatggtgctggagagggcagtgttaatgccggggtgcatgggctttacggt
tcgcaggcgggagctctgcaaggtggattaactggctatcaaacttcgcagttgagccaa
tctgccgctttgcctagaacgtcgcagggaggaggcagctcgttgggaggaatgccatca
tacctgccatattag

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