KEGG   Cryptomeria japonica (Japanese cedar): 131036423
Entry
131036423         CDS       T10556                                 
Name
(RefSeq) UBP1-associated protein 2B
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131036423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjf03019]
    131036423
   03041 Spliceosome [BR:cjf03041]
    131036423
Messenger RNA biogenesis [BR:cjf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     131036423
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     131036423
Spliceosome [BR:cjf03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    131036423
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 131036423
NCBI-ProteinID: XP_057824295
LinkDB
Position
10:complement(816427480..816434389)
AA seq 437 aa
MAKKRKAGEEKLTPQPQPPSEKIIKKEEEEEEKIDNGEEDQISEEDFKALMEPFSKEQLC
HIIRDLAANDANVLSDIRKLADKDPAHRKIFVRGIGWDTTSEILKSVFSEYGELEECTVI
MDKGTGKSKGYGFVTYKHMDAAQRAMKEPSKKIDNRMAACQMACLGPVPQQPTSDPAGRK
IYVSNVPADMPADKLLSFFSKYGEVEEGPLGFDKQTGKSRGFALFIYKTAEGAKKVLEEP
NKNIDGHSMHCKRATENQKPKINVTHTVPSVAGPLDPNDLALTYGKGSSLGAAYGVFPFN
QVAAPGFSNAFNAILASQNQTFAGTSMDPSRLASMNPSLASSLNSSSLSQAFSPSGQGSL
GLVGSYGMHSSLGPYGSQQGGIGGVTPQMFGGYGSQGAALQGLSPYQSQQLSQSGLSRTS
QQTGGSSLGGMSSYLPY
NT seq 1314 nt   +upstreamnt  +downstreamnt
atggccaagaagagaaaggcaggagaggaaaagttaactcctcagccccaacctccatcg
gagaaaattattaagaaagaagaagaagaggaggaaaagattgacaatggagaagaagat
caaatttcagaagaagattttaaagccctaatggagcctttcagcaaagagcagctctgt
catattatccgcgaccttgcagccaacgacgccaatgttttatccgatatacgaaaactc
gccgacaaagatcccgctcacagaaaaatcttcgtccgcggtatcggctgggacaccacc
tccgaaatcttaaaatctgtattttctgaatacggcgagctcgaagaatgcacagtgata
atggataaggggactggaaaatccaagggctatggcttcgtaacctacaaacacatggat
gctgcgcagagggctatgaaagaacccagcaagaagatcgataaccggatggcagcctgc
caaatggcttgtcttggtcccgtgccgcagcaacctactagcgatcctgcgggacgcaag
atttatgtaagtaatgtacccgctgatatgcctgcggataaattgctcagctttttttcg
aaatatggtgaagtagaagaaggcccgctagggtttgataaacagactgggaagtccaga
gggtttgcgctttttatttataagaccgcagaaggagctaagaaggttctggaggagcct
aacaagaacattgatggtcattctatgcattgtaaaagagccactgagaatcaaaagccg
aagattaatgttacacatacagtaccttccgtggcaggtcctctggaccctaacgatctg
gcacttacttatggtaagggttcgagtctcggagcagcctacggagtatttccttttaat
caggttgcagcgccggggtttagtaatgcctttaatgctattttggctagccaaaaccag
acctttgccggcacgagcatggacccgtcgcgtctggcctccatgaatccttctttggca
tcttccttaaactcttcgtcgctttcacaagccttttcgccttcagggcaaggttctttg
ggcctggttgggtcctatggaatgcattcaagtctcgggccctatggctctcagcaggga
ggaattgggggtgttaccccacagatgtttggaggttatggttcgcaaggggctgctctg
caaggactaagtccgtaccaaagtcagcagttgagccagtccggattgtccagaacatcg
cagcagactggaggcagttccttaggagggatgtcatcatatctaccatactag

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