KEGG   Cryptomeria japonica (Japanese cedar): 131036442
Entry
131036442         CDS       T10556                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131036442
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjf03019]
    131036442
   03041 Spliceosome [BR:cjf03041]
    131036442
Messenger RNA biogenesis [BR:cjf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     131036442
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     131036442
Spliceosome [BR:cjf03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    131036442
SSDB
Motif
Pfam: RRM_1 RRM_7 PHM7_cyt TctA Cut8
Other DBs
NCBI-GeneID: 131036442
NCBI-ProteinID: XP_057824316
LinkDB
Position
10:816392165..816395740
AA seq 469 aa
MAKKRKVAEQVEEESITLKNEEVEDQEEVEDEEDEEAEEEAEEEEEEEEEEDEEGGEENE
NGNADGEEGGKEEEEEDGGDEDEVSEEDIKNLLEPFAKEQLISILRDIVARDADVLGNIR
KLADKDPAHRKVFIRGLGWDTTSETLKSVFSEYGELEECIVIMDKATGKSKGYGFVTFKH
MDAAQRALKEPSKKIDSRMTACQMACTGPVPQQPVNDPTGRKIYVSNVPADMSAEKLLSF
FVKYGEVEEGPLGFDKQSGKSRGFALFIYKTAEGAKKALEEPNKNVDGHSMHCKRATDNQ
KQKNASSYTQATLMGPLDPNDLALTHGKGSIFGSAHGVLPGFSNAFNAILASQNQNFGGM
NPSLLASMNPSLASSLNPSTFSQAFSPSAQGSLGSASSYGVHPSFGGGYGSQHGGVGGVN
AAALGIYGSQSAMPGLNAYQNQQLSQSGLPRTSQSGGSSLGGLPSYLQR
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggcgaagaagcgaaaggtcgcagagcaagttgaagaagaatccataaccctaaaaaat
gaggaagtagaagatcaagaggaagtggaagacgaagaggacgaagaagcagaagaagaa
gcagaagaagaagaggaggaggaggaggaggaagatgaagagggaggagaagaaaatgaa
aatggaaatgcagacggcgaggagggcggtaaagaggaggaagaagaagacggcggagat
gaagacgaagtttcagaggaagacataaaaaacctgctggagccattcgccaaagagcag
ctaatcagcatcctccgtgacattgtggccagggatgctgacgtattaggcaacataaga
aagctcgctgacaaagacccagcccaccggaaagtcttcatccgtggcctcggctgggac
accacctctgaaaccctaaaatctgtgttttctgagtatggtgaactcgaagaatgcata
gttataatggacaaggcgaccggaaaatcaaaaggatacggctttgtgaccttcaaacat
atggacgctgcgcagagggctttgaaggagccgagcaagaaaatcgacagccggatgacc
gcctgccagatggcctgcacaggccctgtgccgcagcagcctgttaacgaccccacggga
cgcaagatttatgtaagtaacgtacccgctgatatgtctgctgaaaaattgcttagcttt
tttgttaagtatggtgaagtagaagaagggccgctagggtttgataaacagtctggaaag
tccagagggtttgctctttttatatataagaccgcggaaggcgctaagaaggccctggag
gagcccaataagaacgttgatggccattcaatgcactgtaaaagagccacggataatcaa
aagcagaagaatgctagttcatatacacaggctaccttgatggggcctttggatcctaat
gacttggcactcactcatggcaagggctctatttttgggtctgcccatggtgtattgccc
gggttcagtaatgcttttaatgctattctagctagccaaaaccagaactttggcgggatg
aatccgtcacttctggcttctatgaatccttctttggcctcttcactgaatccctctacg
ttttctcaagccttttcgccctcagcccaaggttctttgggctcggctagctcgtatgga
gtacatcctagttttggagggggttatggctctcaacatggaggagttggtggtgttaat
gcagcggcccttggcatttacggttcacaatcagcaatgccaggactgaatgcatatcaa
aatcagcagctaagccagtctggattgcctagaacatcgcagtcaggaggcagttccttg
ggaggattgccatcatatctgcaacgttag

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