Cryptomeria japonica (Japanese cedar): 131036560
Help
Entry
131036560 CDS
T10556
Name
(RefSeq) auxin response factor 2B-like isoform X3
KO
K14486
auxin response factor
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131036560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3
AUX_IAA
Auxin_resp
Motif
Other DBs
NCBI-GeneID:
131036560
NCBI-ProteinID:
XP_057824435
LinkDB
All DBs
Position
5:complement(763027060..763033940)
Genome browser
AA seq
673 aa
AA seq
DB search
MCCCRLNQTQMKSLLILVWFPRQSRMSAPLIWILLLHRLQGLLCIHFDMSQQPPTQEIVA
RDLHGNDWSFRHIYRGGARTHLLSTGWNVFVRSKRLLPGDAFIFLRGENGQLRVGIRRAM
GQHSNIPSSVMSSHSMQLGVLATASHAISTRTVFSVLYKPRSTGTIIKIGDSDPMRWPDS
KWRCLKVQWDAIITSAIPRAERVSPWKIERALMPSKINPSQTAKKKRPRPHILPSNQDLS
LLDKASIDFTQLQKFNTRVLQGQDVMTLGGSLGENEVDNVPRKVVCVPKLDDVKTKVVCS
QGRLTSESWIPLQRHDSVYRGCFPSFQGIGEMQELCGPYTNRIVENSQGMKVSRNPLEEL
SESNQKQYLTLMAPSRKPSGNMRWNGFNGYPNLSNMGMEALGKWKMHMMPCHSEVSGGND
SVSKNLLRNMQANKQGTKEHQPGFVSREASKDKGVEVISLPANNNCKLSGLHLIDIFSGS
KPNPSKNRVSVNEEDLQVSAHTPKEFLSQFSEVDQRLEPTRLIRSDTSAISCEQETSSWR
PLQETQSRAEINTTRRCTKVHKQDSALGRALDLKKFEGYKELIHELDLMFNFKGQLEDPR
KGWQVVYTDDEGDMMLVGDDPWQEFCSIVRKIFIYTREELEKMTPRSLELKRKFEEPISS
DISTLAATNARHT
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgctgcaggctgaaccagacacagatgaagtctttgctaatattagtttggttc
ccgaggcagagcaggatgagtgctccactgatatggatcctcctcctccaccgccttcaa
ggccttctgtgcattcattttgacatgagtcaacaacctcccactcaagaaatagttgcc
agagatctacatggaaatgattggagtttccggcacatctatcgtggtggggcaaggact
catttgctgtcaactgggtggaatgtctttgttagatccaaaaggcttctgccaggagat
gcgttcatcttcttgaggggtgaaaatggccaactacgtgtagggattaggcgtgccatg
ggtcagcacagtaacattccatcctcagttatgtccagtcacagcatgcagcttggtgtt
cttgctactgcgtcacatgcaatttcaacaaggactgtgtttagtgtcttgtacaagcca
agatctactggtactatcattaaaataggtgattctgatcccatgaggtggccggattca
aagtggagatgccttaaggtgcaatgggatgcaataataacatcagctattccacgagca
gagagggtctcaccatggaaaatagaacgtgccttgatgccttcaaaaattaatccttca
caaacagccaaaaagaagaggccccggccacatatactgccttccaatcaagatttgtca
cttctcgataaggcatcaattgattttactcagttgcaaaaatttaatacaagggtcttg
caaggtcaggatgttatgaccttgggaggatctttgggtgaaaatgaagttgacaatgtt
ccaaggaaagttgtgtgtgtgccaaaactagatgatgtcaaaaccaaagttgtatgctct
cagggaagattgacttctgaaagttggatcccactgcaaaggcatgactcagtatatagg
ggatgttttcccagttttcagggcattggtgaaatgcaagaactgtgtgggccatatact
aatcgtattgttgaaaattcacaaggaatgaaggtttccagaaacccacttgaggaactc
agtgagtctaatcagaagcaatatctgaccttaatggcaccatctcgcaaaccaagtgga
aatatgaggtggaatggcttcaatgggtacccaaatttatcaaacatgggaatggaagcg
ttgggaaaatggaaaatgcatatgatgccgtgccattcagaagtttcagggggaaatgat
agtgtaagcaaaaatttattgagaaacatgcaagctaataaacagggaacgaaagagcat
cagcctggttttgtttcaagggaagcttctaaagataagggagttgaagtcatttcactc
cctgcaaacaataattgcaaattatccggtcttcatttgattgacattttctcaggcagt
aagccaaatccatcaaaaaatagagtttctgtcaacgaggaagacctacaagtttctgct
cataccccaaaagaatttctttcacaattctctgaggttgaccaacggttggagccaaca
aggctgatcaggtctgatacatctgctattagctgtgagcaagaaacatcatcttggaga
ccattacaagaaacacagtccagagctgagataaatactacaaggagatgtactaaggta
cataagcaggatagtgctcttgggcgagctctagatcttaaaaaatttgaaggatacaaa
gagctcatccatgagcttgatttgatgttcaattttaaaggacaactggaggatccaaga
aaaggctggcaagttgtctacacagatgatgagggagatatgatgcttgtaggagatgat
ccctggcaggagttttgcagtatcgtacgtaagatttttatatatactcgagaggagctt
gagaaaatgaccccaaggagtttggagctcaagagaaagtttgaagaaccgatcagtagc
gatatctctactcttgcagccactaatgctcgacacacataa
DBGET
integrated database retrieval system
