KEGG   Cryptomeria japonica (Japanese cedar): 131037309
Entry
131037309         CDS       T10556                                 
Name
(RefSeq) DNA polymerase delta subunit 4
  KO
K03505  DNA polymerase delta subunit 4
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03030  DNA replication
cjf03410  Base excision repair
cjf03420  Nucleotide excision repair
cjf03430  Mismatch repair
cjf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    131037309
   03410 Base excision repair
    131037309
   03420 Nucleotide excision repair
    131037309
   03430 Mismatch repair
    131037309
   03440 Homologous recombination
    131037309
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cjf03032]
    131037309
   03400 DNA repair and recombination proteins [BR:cjf03400]
    131037309
DNA replication proteins [BR:cjf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    131037309
DNA repair and recombination proteins [BR:cjf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      131037309
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     131037309
SSDB
Motif
Pfam: DNA_pol_delta_4 NYAP_N
Other DBs
NCBI-GeneID: 131037309
NCBI-ProteinID: XP_057825384
LinkDB
Position
3:complement(819322094..819323109)
AA seq 130 aa
MANRRSDLRALYPHRKPLNSSSTKLSGSVENGKGLKKENAAISTDSATSAEAALSDSLNS
YDEVYEEEEDCVEQILKQFDLDMRYGPCLGLSRMERWQRAVQLGLSPSQDVKDLLDRAGG
MSDCVWEGRV
NT seq 393 nt   +upstreamnt  +downstreamnt
atggctaacaggagatcagatttgcgagccctgtatcctcataggaagccgctgaattct
tcatctactaaacttagcggtagtgttgaaaatggtaaaggtttgaagaaggaaaatgcc
gctatttctaccgactctgctacttcggcggaggcagcactgtcggactcccttaactca
tatgacgaggtttatgaggaggaagaagactgcgtggagcagatactgaagcagtttgac
ttggacatgcggtacgggccgtgcttaggactcagtcggatggagcgctggcagcgggct
gttcagctcggcctcagtccctcccaggatgttaaggaccttctggacagggcaggcggc
atgtctgattgtgtctgggaaggccgcgtgtag

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