Cryptomeria japonica (Japanese cedar): 131037377
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Entry
131037377 CDS
T10556
Name
(RefSeq) protein indeterminate-domain 4, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjf03000
]
131037377
Transcription factors [BR:
cjf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131037377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_4
zf-met
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
131037377
NCBI-ProteinID:
XP_057825486
LinkDB
All DBs
Position
3:181761229..181764337
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AA seq
643 aa
AA seq
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MLNGSPGSSSGWNNTNNNNNSERTSMTQQTQSNVTSASGEASVSSANRGHQPPSGNNGNN
NSNSGQQAGVGVKRKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLH
RRGHNLPWKLRQRTSKEIRKRVYICPEPTCVHHEPSRALGDLTGIKKHFCRKHGEKKWKC
DKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARATVNA
QPGPGESVGGRTNSSSSGGDHNNSRSASACPDSAPDVKISAPPLCPPSSTTSTPVPPPPL
AWAQAQTGGGGGGGGGSGPKLSLWHGPGPGPPLETSPSSTSSQFNVLDGTYSFPFFSSAS
PAPPNIFSTLLAAGGLQPQNAVGAYSELIGSRVGGGGGGGGGAFVSGGGSGSLFSHQAQQ
TGVSNSNSSAHMSATALLQKAAQMGATASSNSSLLRGFGLSGGHDHHHSSNHNWQGAGCS
SSTGGGPTMQAGGAGAGGAGGGSVSYNQMGMQELMNSLSGAAGGGGSLGLFAPGNLSLTG
LLQAPLFPNGDAGGTAALGVVKSEGGEINISNKDELQMKPTTTLDFLGLGPSGQTLSHTD
LAMITSMNAGTGGGGGAGGGGGAAASGLVESLVQSPVKSWDSS
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatggaagcccgggttcttcgtccgggtggaataatactaataataacaacaat
tcggagagaaccagcatgacccagcagacgcaatccaatgtcacttcggcctctggtgag
gccagtgtttcttctgcaaatcgcgggcaccagccgccgtcagggaataatgggaataat
aacagtaattcggggcagcaggcgggtgtgggggtgaagcgcaagagaaatcttcccgga
atgcctgacccggatgcggaggtgattgcactgtcgccgaagactctgatggcaacgaac
cgattcgtgtgtgaaatctgtaataagggattccagcgggatcagaatctgcagttgcat
cggcggggccacaacctgccgtggaagctgaggcagcggacgagcaaggagatcaggaag
agggtgtacatatgcccggaaccgacatgcgttcaccatgaaccgtcacgggctttgggt
gaccttacgggtattaagaagcacttctgccggaagcacggcgagaagaagtggaagtgt
gacaagtgctccaagcgctatgccgtgcagtccgactggaaggcccattccaagacctgc
ggaaccagagaataccgctgcgattgcggcacccttttttccaggagggatagctttata
actcaccgggccttctgtgatgcgctcgctgaggaaagtgcccgggctacggttaatgca
cagccaggaccgggtgagtccgtcggtggacggacgaattcttcatcatccggtggtgac
cataacaacagccggtcggcaagtgcttgtcctgattctgcaccagatgtgaaaatttct
gctccacctctgtgcccgccttcttccaccacatcaacgcctgttcctccgccaccgctt
gcctgggcacaggcccaaacaggtggcggtggcggtggcggtggcggatcgggacccaag
ctgtcattatggcacggtccaggacctgggcctccattagagacatctccctcatcaact
tcatcacaattcaatgtacttgacggaacctattcgtttcccttcttttcttctgcttca
ccggcccctccaaacatcttttccactctgcttgcagccggtgggttgcagccacaaaat
gctgttggtgcgtactctgaactgattggttcccgggtgggcggtggcggtggcggtggc
ggtggtgcgtttgtaagtgggggtgggagtggcagtctttttagccaccaggcacagcaa
acgggtgtgagcaatagcaatagctcggcgcatatgtcggccacggcgttgttgcagaag
gctgcgcagatgggtgcgactgcgagcagcaattcgtcgttgctgagaggctttggtctg
tctggcgggcatgatcatcatcacagctcgaaccacaactggcagggagccggttgcagt
agcagtacaggagggggacccactatgcaggctggtggtgcaggtgcaggtggtgccggc
ggtggatccgtgtcgtacaatcagatgggtatgcaggagctaatgaactcgttgtctggt
gccgccggcgggggagggagcctggggctttttgcgccgggaaatctgagtctgactggg
cttctgcaggcgccgcttttccccaatggcgatgccggcggcactgccgctcttggagta
gttaagtccgaaggaggagaaattaatatcagtaataaagatgagttgcagatgaagccc
accacaacgctcgattttttggggttggggccttccgggcagacattgtctcacacagac
ttggccatgataacgtccatgaacgctgggacaggaggaggtggaggtgcaggaggagga
ggcggcgccgccgcctctggccttgtagagtctctggtgcagtcgccggtaaagtcatgg
gatagttcatag
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