Cryptomeria japonica (Japanese cedar): 131038275
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Entry
131038275 CDS
T10556
Name
(RefSeq) DNA repair protein RAD5A isoform X1
KO
K15505
DNA repair protein RAD5 [EC:5.6.2.-]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Rad6 epistasis group
131038275
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131038275
NCBI-ProteinID:
XP_057826599
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Position
11:600978107..601067003
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AA seq
1070 aa
AA seq
DB search
MGSKGNEGMLEAMRAVLGAETSDMEMIRALHLAKNDVTAAINIIFDAPSLQNREKISVKR
TTSGYGARVSSTESNPHGAMARSDARCLENNTFEPKFSLPSQNAYDFLNSNRASDGMERC
SNGVSTVGCSDNDKSSVADGWWLVGCADLTAYSTCKGRKLGLGEAVMFSFPKKNSNNGAA
AKGGAKPWGRGRPAASFSEIVRFSTKQSGEVGRIPTEWARCLIPLVNSEKVKIEGQCKAA
PENLGLMDNILLSVSLYINSYMLQNCAQSSSKLVRSSTDDATFHPLPALFKLLGKEPVKK
ADFTPEDIQITRKQSIDAKGTSGIPTSLLPADKRRKLASDGSKQDTDGEECLSDSDLNKL
VGTSDSCNLEEIDPPCTLQCELRPYQKQALYWMSKLEKGAETEEAARTLHPCWDEYHLED
KMATAVFINSFSGDATIEFPSALQLTRGGILADAMGLGKTVMTISLLLANSGKGGASGMD
SAESFNESSYCERTVVDPFGMGVAPESPLCPSKRQILSMLKKPSTRLHKGGGNLIVCPMT
LLGQWKTEIETHTQPGALSVYVHYGQSRTKDVKTLLQQDVVLTTYGVLSSEYQPENSQEE
GVLHSIHWYRVVLDEAHSIKSSKSQSSQAAYALVADCRWCLTGTPIQNNLEDVYSLLHFL
RVEPWSNWGWWYKLIQKPFEEGDERGLKLVQAILRSLMLRRTKDTTDKEGRPIIVLPPAS
VQVVYCELTETEKDFYGALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLV
MSRGDTQEYSDLDKLAKRFLKGGQQAANGECKSALSKAYIQEVVEEIRKGEKAECPICLE
AVEDAVLTPCAHCMCRECLLASWRSTMSGSCPICRKALTRQDLITAPRESRFHVDVEKNW
TESSKISALLRHLEDLRPLGSKSIIFSQWTAFLDLLQIPLSRGNFQFVRLDGTLNQQQRE
RVIREFSENPHILVMLISLKAGGVGINLTAASNVFLLDPWWNPAVEEQAIMRIHRIGQTK
SVSIKRFIMKDTVEERMQQVQARKQRMISGALTDQEVRSARIEELKMLFT
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcaagggtaacgaagggatgttggaagccatgcgggctgttctgggcgcggag
acgtcggacatggaaatgattcgagctcttcatcttgcgaaaaatgacgttacggccgct
attaacataattttcgacgcgcccagtcttcagaatagagaaaaaattagtgttaaacgc
acgacttctggctatggagctagggtttcaagcacagagagcaacccccacggagctatg
gcgcgctccgatgccaggtgcttggaaaacaatacgtttgagccgaagttttctcttcct
tctcaaaatgcttacgatttcttgaattcgaacagggcaagtgatggcatggaacgatgt
agcaatggggtttctactgttggttgtagtgataacgataagtcttcagtggcagatggg
tggtggttggtaggctgtgctgatttgacggcttattcgacatgtaagggccgaaagctt
ggacttggggaggctgtgatgttttcttttcctaagaagaatagtaataatggcgctgct
gctaagggtggtgctaaaccttgggggaggggaagacctgctgcttccttttctgaaatt
gtgaggttttctacgaagcagtctggcgaggttggccgtatccctacagaatgggcccgc
tgtcttatacctttggtgaactcggagaaggtcaaaatagagggtcagtgcaaagcggct
ccagaaaatcttggactcatggacaatatactcctctctgtcagcttgtacataaatagt
tatatgctccaaaattgtgctcaaagctcatcaaagttagttcgttcctcaacagatgat
gctacttttcatcctcttccagctttgtttaagttgctcggcaaagagcctgttaagaaa
gcagatttcactcctgaagatattcagataacccgaaagcaatctatagacgctaagggt
acttctggaataccaacatcattgttacctgcagacaaaaggaggaaattagcttctgat
ggaagtaaacaagacaccgacggtgaagagtgtctctctgattctgatttgaacaagctt
gttggtacctcagacagctgtaatctggaggagatcgatccaccctgtactctgcagtgt
gaattgcgcccatatcagaagcaagctttgtactggatgtctaaattggagaagggagca
gaaacggaggaggcagcaagaactcttcatccctgttgggatgaataccatcttgaagac
aagatggcaactgcagtatttattaattcattttcaggggatgccaccattgagtttccc
agtgccttgcaactgactcgaggagggattttggcagatgccatggggcttggaaagact
gtcatgacaatatcgcttctacttgcaaattctggtaaaggtggagcgagtggtatggat
tctgctgagtcattcaatgagagcagttattgtgaaagaacagttgttgatccttttggg
atgggtgtagctcccgaatcacctctgtgccctagcaaaaggcaaatcctaagtatgctg
aagaaaccaagcaccagactacataaaggagggggaaaccttatagtatgcccaatgaca
ttgctcggtcagtggaagacagaaattgaaacccatacacaacctggagccctgtctgtg
tatgttcattatggacaaagcagaacaaaggacgtcaaaactcttttgcagcaggacgta
gtcttgacaacttatggggtcttatcatcagaataccaacctgagaattctcaagaagaa
ggtgtgcttcactcaatacactggtatagggtagttcttgatgaagcacatagtataaag
tcttctaagagccaatcatcccaggctgcttatgctcttgttgctgattgtcgttggtgt
ctcactggaaccccgattcagaataacttggaggatgtgtacagtcttcttcactttctt
cgggtcgagccatggagtaattggggatggtggtacaaattgattcagaagccatttgag
gagggcgatgaacgtggattgaagcttgttcaagctatcttgcggtcattaatgttgcgg
aggacaaaagatactactgacaaggagggcagacctatcattgttcttcctccagccagt
gtccaagtagtctattgtgagcttacagaaactgagaaagatttctatggggccttattt
aaaaggtctaaggtcaagtttgatcagtttgtggaacagggcagagttctccacaattat
gcttctattttggagctgcttctgaggttacgtcaatgttgtgaccatccttttcttgtt
atgagccgtggtgatacacaagagtattctgatctggataagctagcaaaacgttttctt
aaaggaggtcagcaggctgcaaacggggaatgtaaatctgcactttctaaggcttatatt
caagaggtggttgaagaaattcgcaaaggggaaaaggcagagtgtccaatttgccttgaa
gctgttgaagatgcagtccttactccgtgtgcacactgcatgtgtcgtgaatgtcttctt
gcaagctggcgcagcactatgagtgggtcttgtcctatatgtaggaaagcattaactagg
caggatcttatcacagctcccagagaaagtcgatttcatgtggatgttgaaaagaattgg
acagaatcatcaaagatttcagctcttctacgacatctggaagacctcagaccattggga
tctaaaagcattatctttagccagtggacagcctttctagacttgttgcaaatacctctt
tccagaggcaatttccagtttgtccgcttggatgggacactaaatcaacaacagagagaa
agagtgatacgggagtttagtgaaaatcctcacattttggtgatgttgatttcgttgaag
gctggaggtgtgggaattaatctgactgcagcttctaatgtttttttattggatccttgg
tggaacccagctgttgaggagcaggctataatgcgcattcatcgcattggccaaacgaaa
tcagtttcgatcaaacgttttattatgaaggatactgtagaagagaggatgcagcaggtt
caagcacgtaagcaacggatgatttctggagcattgacagaccaagaggttcgatctgca
cggattgaggagctgaaaatgctgtttacgtga
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