Cryptomeria japonica (Japanese cedar): 131038394
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Entry
131038394 CDS
T10556
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
131038394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cjf03011
]
131038394
Ribosome [BR:
cjf03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
131038394
Bacteria
131038394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP4
RRP40_S1
EMC1_C
Motif
Other DBs
NCBI-GeneID:
131038394
NCBI-ProteinID:
XP_057826802
LinkDB
All DBs
Position
2:650950138..651027926
Genome browser
AA seq
458 aa
AA seq
DB search
MAAHISYCSHLTSRTIFLPHQNSQQCRLHGKNSAKVLNKRDETPRNTINNFHFLQANTSV
YSTKLGNAIILERKSNIYNLAKAILRPRSPFKYEPKREEEKEDLEYYNPKMGDLVVGVVV
SCNDNKFKINIGSESLASMYLGELLPINQSETAQISCELPANINVEGASESSSSYSSAVN
GYYDRFANGRMGILTNKIAATKSVIEEGTLIYAEVLGRSFNGETLLSSRLFARKIAWQRL
RQIKHINKPIEITISEWNTGGLVSRIEGLRGFLPKREILNTPLDNFSVLKEYVGTRMEVV
IIDVNEEVGVLVVSEKSAWEMRNLYQGSLLQGTIKRLYPNGARVMVDGTDKSGFLHIGNM
SHGRVSSVTDLFSVGERVKVMVVRSNIPNKLYFSTANLESKNGLILYNKERVFEEAEQMA
AAYRSKFGFMHEMEASVDDLDICDNTFKCYANWDWFKN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcacatctcttattgcagtcatttaacctcacgcactatcttccttcctcat
caaaattctcaacaatgcagactgcatggaaaaaattcggccaaagttctcaacaaaaga
gacgaaaccccccgaaacacgatcaataatttccattttctccaagcaaatacttctgta
tactctactaaactgggaaatgcaataatcctggagagaaaatcaaatatatataatcta
gccaaagcaattttaagacccagaagcccttttaagtatgaaccaaaacgagaagaagaa
aaggaagatttggagtattataatcccaaaatgggggacctcgttgttggggttgtggtt
tcctgcaatgataataaattcaagatcaatataggctccgaaagccttgcttccatgtat
ttgggtgagttactccctattaaccaatctgagaccgcccaaatatcctgtgaattgccc
gcgaacataaatgtagagggagcatctgaatcatcatcttcttattcgtctgctgttaat
ggttattatgaccgttttgcgaatggtagaatgggtattctgacgaacaaaattgcggca
acaaagtctgttattgaagagggaactctaatctatgctgaagttcttggtcgttctttt
aatggcgagactctgctttcgtccaggctttttgctagaaagattgcatggcaacgactc
aggcagataaaacatataaacaaaccaattgaaatcaccatttctgaatggaacactggt
ggccttgtctcacgaattgaggggctaagagggtttcttcccaaacgtgaaattctgaat
acacctcttgataatttttcagtgttaaaagaatatgttggcacaaggatggaagtggtt
attattgacgtgaatgaagaagtaggtgttctagtagttagtgaaaaaagcgcttgggaa
atgaggaatttgtatcaaggcagtttactgcagggaacaattaaaaggctatatccaaat
ggggcacgagtcatggttgatggaacagacaaaagtggtttccttcacattggaaacatg
tctcatggaagagtttcatccgtgactgatttgttctcagtgggagaaagggtgaaagtt
atggtggttcgctccaatataccaaataagctctattttagtacggccaacttggagagt
aagaacggattgattctgtacaataaagagagagtttttgaagaagcagaacagatggca
gctgcttacagaagtaaatttggttttatgcatgaaatggaggccagtgtagatgatcta
gacatatgtgacaatacttttaaatgctatgcaaattgggactggtttaaaaattag
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