Cryptomeria japonica (Japanese cedar): 131038488
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Entry
131038488 CDS
T10556
Name
(RefSeq) protein transport protein SEC23 G
KO
K14006
protein transport protein SEC23
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131038488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131038488
Membrane trafficking [BR:
cjf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
131038488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
131038488
NCBI-ProteinID:
XP_057826909
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Position
10:complement(404274634..404317587)
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AA seq
768 aa
AA seq
DB search
MDFSELEAIDGLRWAWNSWASSPVEAARMVIPLGLLCTPLMPLNDVPLLPYDPLLCNSCH
AVLNPYCRIDYHARLWICPFCHHRSTFPPSYASITEDNLPAELFPTYSTVEYHLNRSSAS
IAASSASRFSSHQQMMQGAGIPGFVFVVDTCVATEDLQHLKNEILHVFSQLPESAVVGLI
SFGDMVTVHDLSYNYCSRAVVIHGQRELSSTQVQDLLQISPRQLRQFGKAAVHHQGFLLP
MSECEFNFTTALEELRPNSFPVLPDHRPCRATGAAIAVATGLLEGCLPNAGARIMVFVGG
PTTIGPGIVVDADLGKNIRTHQDLVNGNASYYRTSCKFYKQLAQRLVAAGLVLDVFACSL
DQVGTAEMKPAVESSGGLMMLAETFDSDQFKKCLQRLFACDKQGHLKMNFNATIDIITTK
EVKICGALGPCSSLQKKATSVSEHEIGIGGTRAWKMSTLTNKTCLAFFFEVSSQQSVKIQ
PGTAFFIQFLTQYQHGNGQVRLRVTTTARRWVDGTQLQELAAGFDQEAAAAIMARLAVHK
SESEEIHEILRWLDRMLIRFASTFGDYIKDDPTSFRFSSNFSLYPQFMYHLRRSQFLQVF
NNTPDETAFFRLMLNREAVVGSLIMIQPTLFAYSFEGPPVPVLLDVSSISADCILLFDSY
FYVLVHYGSTIAQWRKLGYQNDPSHENFKKLLEAPLQDAEVLLAERMPVPKFIECDQHGS
QARFLLAKLNPSVTHNTNQYGNNSEVIFTDDVSLQVFVEHLQKLAVQA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagtgagcttgaggcgatcgacggcttgcggtgggcatggaattcgtgggcg
agcagtcctgtagaggcggcacggatggtgatcccgctgggcctcctctgcactccactg
atgcccctcaacgatgtgccgctccttccctatgaccctctcctctgcaattcctgccac
gccgtcctcaacccttactgccgcatcgactaccatgccaggctctggatttgccccttc
tgccaccaccgcagtactttccccccttcctatgcttccatcactgaggacaatctcccc
gctgagctcttccccacctattccaccgtcgaataccatctcaatcgatcctctgcctct
attgctgcttcttctgcttccagattctctagtcatcaacagatgatgcaaggagcaggg
attcctggatttgtatttgtggtggacacttgtgttgcaacagaagatcttcagcatttg
aagaatgaaatccttcatgtttttagccagttgccggagagtgcagtggtgggtctcatc
tcttttggggacatggtcactgttcatgatctttcctacaattactgctccagggccgtt
gttatccacggacaaagagagctttcctcgacccaggtgcaagatcttttgcagatttct
cctcgacagctcagacaatttggaaaagctgccgtacatcatcaaggatttcttctaccc
atgtctgaatgtgaattcaatttcactacagcccttgaagaattgcggcccaattccttt
ccggttttgcctgatcatcgtccatgtcgagctactggtgcagctatagcagttgctaca
gggcttctagaggggtgtctacctaatgcaggtgctcgaattatggtttttgttggagga
ccaacaacaattgggcctggaatagttgtagatgctgatcttggcaaaaacattcgcacc
catcaggaccttgtcaacggtaatgcatcctattacagaacatcttgcaagttctacaag
cagctcgcacagaggttagtagcagcagggcttgttttggatgtttttgcctgctctttg
gatcaagtcggcactgcagaaatgaaacctgcagtagaaagttctggaggactgatgatg
cttgcagagacttttgattctgatcagttcaagaaatgtttgcaacgcctctttgcttgt
gacaaacaaggccacctaaagatgaactttaatgcaacaattgacataatcacaactaag
gaggtcaaaatatgtggtgctcttggaccatgctcttcattgcagaaaaaggctacatca
gtaagtgagcatgagataggaattggaggcactcgtgcatggaaaatgagtacactcact
aacaaaacttgtctggctttcttctttgaggtaagcagtcagcagtctgtcaaaatccaa
ccaggcactgcatttttcatccaattcctcacacaatatcagcatggaaatggtcaagtc
cgtttgcgagtgactactactgcaagaaggtgggttgatggaacccagttgcaggaattg
gcagctgggtttgatcaggaagctgcagcagctatcatggcccggcttgcagtgcacaaa
agtgagagtgaggagattcatgagattctcaggtggctagataggatgttgattcgattt
gcatcaacatttggagattatattaaagatgacccaacatccttccgcttttcgtccaat
ttttctctttatcctcagttcatgtaccatctacgtcgatcacaattccttcaagtcttc
aataacacccctgatgagactgcattctttagactgatgctaaaccgggaagctgtagtt
ggatctcttatcatgatccagcctactctttttgcttattcttttgaaggtcctcctgtg
cctgtgctacttgatgtgagctctatttcagctgattgtattctgctttttgattcctac
ttctatgttttggtgcattatgggtctacaattgcacagtggcggaagcttgggtaccag
aatgaccctagccatgagaatttcaagaagctccttgaggccccacttcaagatgcagaa
gttttacttgcagaacgtatgccagtgcccaaatttattgaatgtgatcaacatggtagt
caagcaagatttttgcttgctaaattgaacccatctgtcactcacaatacaaatcaatat
gggaataattccgaggtgatattcacagatgatgtaagtttgcaagtgtttgtagaacat
ctccagaagttggcagttcaagcctaa
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