Cryptomeria japonica (Japanese cedar): 131038925
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Entry
131038925 CDS
T10556
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
131038925
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
HECT type E3
131038925
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
131038925
NCBI-ProteinID:
XP_057827496
LinkDB
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Position
3:946591635..946604389
Genome browser
AA seq
1871 aa
AA seq
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MLLAGLHSFMETRSRKRAEATAKRPSSAQSSPCANKRARLSSSTFASSAASFPTSPRARL
PIRSVSSPVIASFHPELTGIDLEMESSSSSARKRDHEDKEIEKGKEKERRGGYSDDNSDE
DEGVGSPHHNVTTTASSALKGLLRKLGAGLDDLLPPPMPFSQQSSRLKRILSGLRAEGEV
GRQIEALTQLCEMLSIATEDSLSSFSVDSFVPVLVALLNHEGDPDVMLLAARALTHLCEV
LPQACASVVHYGAVPSFCARLLTIEYMDLAEQSLEALEKISHEHPAACLRAGGLMAVLSY
LDFFSTGVQRVALSTAANICKKLPSDAADFLMEAVPILTNLLQYNDSKVVEHASICLTRI
AESFASSSDKLDELCNHGLVAQAVRLVSVSNSGAGQTSLSAPTYTGLIRLLSTFAGGSAL
AAKTLFDLNISHILRDVLAASSFVSGISASPALNRPPDQTYEIVTLLNELLPPLAEGTIS
LPVSHTTDTKCSSRKNVLDNNAGKIDDMNETMAEMSAREKLLRDQPELLVHFGIDILPVL
VQVYGSSVRSAVRHKCIAVISKLVYFSTSDMLTSLLRETNISSFLAGVLGSKDPYVLIPA
LQIADILIQKLPDTFSKMFVKEGVLHAVDTLISADMSGSVSAQAFTPGKDEISESALPNS
TGTIMPLDESNSKAVGKEEYKGSNVGRCSSPSGEAMIPIIKSDMWATVGTHAKHFKDTYF
PADSEIVDGGMTESLRKLKTICMKLNDELQGNDKVVEIVSTDEERMLLLVAEMLSELVKG
DGVSTFEFVGSGVIPSLLNYFSYGALSKQNMTEAESTKVFRNALNRFKLFIRLTLPLNGE
DGREAPLTILVHKLQNALSSLERFPVILSHSQRLRGGNASLSGLSALRQPVKLRLCRGEG
ETSLRDYSSNVVLIDSLANLAAVEEFLWPRVQRGEADLKTSSNLIPSDSCGAQAGTTDTS
PTSSAPVSEERSVSNRHSGSSATKDLEGASASSSKGKEKAVSKCVIEETKAAKSRNNTRM
RVSDGASQLSQHPSESVAEEEELDGSPAELDDSVPMEEEISEDEDDDYEGHLDERMLYGE
EQPSSSVTERVHAVQLGDHMDESATMIATTVEIANASQPPSRVDSRSALFESREGSEFLR
SASLFPRGSLSFARAAMSGLLSVGGRSARGSRGFRTLPMADPAMTPSRLDFFIGGKKVDR
SLTIYQAIQRQAVADEDSTVSAHAPVEGRRLWDEVYSITYRIVTPPEEKTCAGVSGTSSS
KSAEDSPTDSSSIKASLKETSFLGSILQGKLPCDLEKSNCTYDILLLLRVLEGLNRLAPR
LRAEEASDAFAEGKITSFEELKVKGPTVPQNDFLSGKLTPKLARQMQDPLALCSGGLPSW
CHQLTKACPFLFPFEIRRQYFHSASFGSLRALQHLQQQQSAENPNATNEQGLRVGRLQRQ
KVRVSRNRILDSAMKVMELYSSQNSVLEVEYFDEVGTGLGPTLEFYTLLSHELQKDALGM
WRSSSCSIEVASGEDTEMQDVQQNEEFSLISEASEEPKVGNQEFVQAPRGLFPRPWPPNA
DSLCGKQFSKVIDNFRLLGRVMAKALQDRRLLDLPFSTAFYKLVLGQELDLFDIQSFDLE
LGTTLQEIQALVRRKQFMESLHTDKNSAHDLHFRNARIEDLCLDFTLPGYSDYVLKPGGN
NIMVDLENLEEYLHLAADATIRTGVMPQMEAFRAGFNEVFPLTSLHIFSESELECLLCGG
SDLWTAQSLFEHIKFDHGYTSSSPPIINLLEIIGEFTPEQKRAFLQFVTGAPRLPPGGLA
ALNPRLTIVRKHPTGTNGGSKGASTQAADGDLPSVMTCANYLKLPPYSSKEVMHDRLMYA
ITEGQGSFDLS
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atgcttttagcggggttgcattcttttatggaaacacgcagtcgaaaacgagcagaggcc
acagcaaaaaggccatcctctgcccaatcatcaccgtgtgcaaacaagcgagctcgcctt
tcctcttccacatttgcatcttctgctgcttcttttccaacttctcctcgtgcacgccta
ccaataagatctgtctctagtcctgtgattgcaagttttcatcctgaattaactggtatt
gatttggaaatggagtcatcttccagttcagcaaggaaaagagatcatgaggacaaggag
attgaaaagggtaaggagaaagaaagaagagggggctatagtgatgacaattcagatgaa
gatgaaggtgttggcagtcctcaccataatgtcaccactactgcaagcagtgcactgaag
ggccttctcaggaaacttggggctgggctggatgaccttttgccaccacctatgcccttt
tcacagcagagcagtcgcctgaaaagaattttatctggtttgagagctgagggtgaggtt
ggtcgtcagattgaggcgctcactcagctatgtgagatgttatccattgcaactgaggat
tcgttgagcagtttttcagttgattcatttgttccagtgctggtggctttactgaaccat
gagggcgatcctgatgtaatgcttcttgctgctagagcattgactcacctctgtgaagtg
cttcctcaagcctgtgcatcagttgttcattatggtgcggtaccttctttttgtgctcgt
ttgctaactattgagtatatggatttggcagaacagtccttggaagcactggagaaaata
tctcatgagcatcctgctgcctgccttcgtgctggtggtcttatggcagtgctgtcttat
ttggacttcttctccactggtgttcagagagtagcattatccactgctgcaaacatttgc
aagaagcttccttctgatgcggcagattttttaatggaagctgtcccgatattaacaaat
cttcttcagtataacgactccaaggtggtagaacacgcatctatttgcttgacacgaatt
gcagaatcatttgcatcttcttctgataagttggatgaactctgtaatcatggattggta
gcacaagcagtaagacttgtatctgtgagtaattcaggagctggccagacatctttgagt
gcaccaacttacacggggttgattaggcttctctccacatttgctggtgggtctgcatta
gctgccaagactctttttgaccttaatataagtcatattcttagagatgttctagctgct
tctagttttgtttctgggatttcagcttcacctgcactgaacagacctcctgatcagaca
tatgaaattgtaaccctattgaacgagcttcttccacccttggctgaagggacaatatct
cttcctgtaagtcatactacggatactaagtgctcctcaagaaaaaatgtattggacaat
aatgcaggaaagatagatgatatgaatgaaacaatggcagaaatgtctgctcgtgaaaag
ctgttgcgcgatcaaccagaacttctggtacattttgggattgatattttaccagtcctg
gtccaggtatatggctcaagcgtgaggtctgctgttcgacacaagtgtattgctgttatc
agcaagttggtgtattttagcacttctgatatgctgacatctctacttcgcgagacaaac
atatcaagctttttggctggagttctaggatcgaaagatccgtatgttttgattcctgct
cttcagatagcagacattcttatacaaaagcttcctgatactttttcaaagatgtttgtc
aaggaaggcgttcttcatgcagttgatacccttatatcagcagatatgtctggttcagtt
tctgcacaggcatttaccccagggaaggatgaaatatcggaatcggctttgccaaattcc
acaggtactataatgcccttggatgaatcaaatagtaaagcagttggaaaggaagaatat
aaaggctcaaatgttggaaggtgtagttcaccttctggagaggcaatgattcctatcatt
aagtcagatatgtgggctactgttggtactcatgcaaaacatttcaaagatacatacttc
ccagcagattcagagattgttgatggaggaatgacagagtctctgcgcaagttgaaaaca
atttgcatgaagttaaatgatgaattgcaaggtaatgataaagtggtagagattgtttct
actgacgaagaacgcatgttgttgcttgtagcagagatgctttcagaacttgttaaaggc
gatggtgtttcaacttttgagtttgtcggaagtggggtcattccatcattactcaattat
ttttcatatggagctttgtctaagcagaatatgacagaagcagagtcaacaaaagttttt
cgcaacgcattgaataggttcaagttgtttatcaggcttactcttcctctgaatggtgag
gatgggagggaagctccgttaacaatcttggttcataaactgcaaaatgcattatcttcc
ttagaacgctttcctgttatcctaagccattctcagagattacgtggggggaatgcaagt
ttatcaggactcagtgcattacgccaacctgttaaactgcgtctgtgtagaggagaagga
gaaacatctcttcgagattactcatcaaatgttgtactcattgattctttggctaatctt
gctgctgttgaggaatttctttggcctagagttcaaagaggtgaggcagacttaaaaact
tcttcaaatttaatcccttcagatagttgtggtgcccaggctggaacaactgacacatct
ccaacatcatctgcaccagtttctgaagaacggtctgtttcaaacagacacagtggaagt
tctgccaccaaggacttagagggagcaagtgcaagctcatcaaagggaaaggaaaaagct
gtttcaaaatgtgtcatagaggaaactaaggctgcaaaatcaaggaataatactcgtatg
agagtgtctgatggagcatcacaattgagccaacatcctagtgagtctgttgctgaggaa
gaagaactcgatggatctcctgctgaacttgatgactctgtaccaatggaagaagaaatt
tctgaagatgaagatgatgattatgaaggacacttagatgaacgcatgctatatggagag
gaacagccctcatcgtctgtaacagaaagggtgcatgccgtacaattaggggatcacatg
gatgagagtgccacaatgattgccaccactgtagaaattgcaaatgcatctcaaccgcct
tccagagttgatagcagatctgctttgtttgaaagtcgtgaaggcagtgagttcttaaga
agtgcttctttatttccaagaggatcattatcctttgctagggctgctatgtctgggctt
ttatctgttggtggcaggagtgcccgagggagtagaggtttccggaccctgccaatggca
gacccagccatgactccctctagattggattttttcataggtggaaagaaagtagacaga
tcactaacaatttatcaagcaattcagcggcaggcagtagcagatgaagatagtacagtt
tcagctcatgctcctgttgagggtcgtagactttgggatgaagtttactctatcacatat
cgaattgttacccctccagaagaaaaaacttgtgcaggagtatcgggaacttcttccagc
aagtctgctgaggattccccgactgacagctcaagtattaaagcttcattgaaagaaaca
tcatttttaggtagcattttacaaggaaagcttccttgtgacctagaaaagtcaaactgt
acatatgatattctattgttgcttcgtgttctggaaggtctcaatcgattagctcctcgt
ctaagagctgaagaggcatcagatgcatttgcagaagggaaaatcactagctttgaagaa
ctaaaagtgaaaggtcctacagtccctcaaaatgactttttaagtggcaagttgacaccc
aaattggcacggcaaatgcaggatcctctggcgctttgcagtggtggccttccttcttgg
tgtcatcagctaaccaaagcatgtcccttcttatttccatttgagataaggaggcagtac
tttcattcagcttcctttgggtcgttgcgtgccctacagcacttacagcagcaacagagt
gctgaaaatccaaatgcaactaatgagcaaggattacgagttggtaggttgcagcgtcaa
aaggttcgtgtttcaagaaatcgtatactagattcagctatgaaggtaatggaactgtat
tctagtcagaattcagttcttgaagtggagtactttgatgaggttggcacgggtctaggt
ccaactttggagttttatacacttcttagccatgaattgcaaaaagatgcgcttggaatg
tggaggtctagttcttgttctatagaagttgcttcaggagaagacactgaaatgcaggat
gttcaacagaatgaagaattttctctcataagtgaagccagcgaagaaccaaaagtaggc
aatcaagagtttgtccaagcacctcgaggattatttcctcgtccatggccacctaatgca
gattccttatgtggaaaacagttttctaaagtaatagataattttcgtctgcttggacgt
gttatggcaaaagctcttcaggataggcggctcctcgatttgcctttttcaacagctttt
tataaacttgtccttgggcaggagctcgatttatttgatattcagtcttttgatcttgaa
ctgggaacaactttacaagaaatacaagctcttgttcgtagaaagcagttcatggagtcc
ctgcacactgacaagaactctgcacatgatttacattttcggaatgcaagaattgaggat
ctttgtcttgattttactcttccaggttactctgattatgttctcaaaccaggagggaac
aatatcatggttgatctggagaatttagaagagtatcttcatttagctgcagatgcaact
attagaacaggagtcatgccacaaatggaagcattcagggctggatttaatgaggttttc
cctttgacatctttgcacatattttctgaaagtgaactggaatgtctgctatgtggtgga
agtgatttatggacggctcaatcactttttgagcacatcaaatttgatcatggttacaca
tccagcagcccacccattataaatctgcttgagatcataggggaatttactcctgaacag
aaacgggcatttttacaatttgtaaccggagctcccagacttcctcctggagggttagcg
gcattaaatccaagattgacaattgttcggaagcatccaacaggaacaaatggagggtcg
aagggagcaagtactcaagcggctgatggagacttgcctagtgtcatgacatgtgccaat
taccttaaattgcctccttactctagcaaggaagtcatgcatgataggttgatgtatgct
ataacagaaggacaaggatcctttgacctctcttaa
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