Cryptomeria japonica (Japanese cedar): 131039420
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Entry
131039420 CDS
T10556
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131039420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjf03009
]
131039420
Ribosome biogenesis [BR:
cjf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
131039420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Nucleolin_bd
AAA_5
AAA_22
TIP49
AAA_16
AAA_14
AAA_2
AAA_17
AAA_33
RNA_helicase
AAA_28
NPHP3_N
AAA_18
nSTAND3
Viral_helicase1
IstB_IS21
Rad17
ATPase_2
Parvo_NS1
Bac_DnaA
Mg_chelatase
AAA_11
NB-ARC
TsaE
AAA_3
NACHT
ABC_tran
AAA_19
Zeta_toxin
TniB
Cytidylate_kin2
PduV-EutP
Tankyrase_bdg_C
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
131039420
NCBI-ProteinID:
XP_057828162
LinkDB
All DBs
Position
10:476770998..476853047
Genome browser
AA seq
792 aa
AA seq
DB search
MRHKTRCPKVRTVHRSFFDRLILPRVEQYAINHDVHDLDATVNYLRTNYREYRRHKEDPF
RKIVLRAIQTLQHNSNHQKRKCNSLHEEEEEEEEEDEEEEEASSSRESDSNGSQFELNPT
SFPGLMNTVLRTNYGANVNASPPKPSESTKSTQENTKMDINNELCSENGNELDGIVSNSK
ERQESQGGLEVKLKKEDKGFDSRVMFKDLGGLSGVINEVMEIIYPLFHPEIYPWLGVQPM
KGILLHGPPGCGKTKLAHAIANEAGVPFYKISATEVVSGVSGESEENIRNLFSKALKTAP
AIIFIDEIDAISAKRENLQREMERRIVVQLLTCMDESHETMISADQESDAETPKKKSGHV
LVIGATNRPDALDPALRRPGRFDREIVLGVPDENSRVEILSVITRGLRLEGSFDFKKIAK
CTPGFVGADLTALTREAASVAIKRIIASRNPQNLVKCGDIEVTEYAWWKKAWTQDEMNNL
SITMADFEEAATKVQPSTRREGFSAIPNVKWDDVGALSSLRKDFEMYVVRRIKHPEEYEA
LGMDLDNGFLLYGPPGCGKTLVAKAVANEAGSNFIHIKGPELLNKYVGESELAIRTIFTR
ARTCSPCILFFDEIDALTTKRGKDGGWVVERLLNQLLIEMDGSEKRKGVFVIGATNRPEV
MDPAVLRPGRFGKLLYVPIPDAEGRVSILKTLTRKRPLSAEVDLNYIGHSQSCENFSGAD
LAALVNEACMCALQEKIAAAVEADSDVRKYALVVNLSHFEQAFKRVVPSVSKVQRHYYEQ
VFQKFMGLTGKQ
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaggcataaaacgaggtgtcctaaggtgcgcactgtccatcgttcattcttcgatagg
ctgatacttccgagggttgagcaatacgccattaaccacgacgtccacgacctcgacgcc
actgttaattatctcagaacaaattaccgcgagtacagacgtcacaaagaagaccccttt
cgtaaaatagttctccgcgccatccaaaccctccaacataacagtaatcatcaaaagaga
aagtgcaacagcctccatgaagaggaggaagaggaggaggaggaagatgaggaggaggag
gaagcatcatcatcacgagaaagcgacagcaacgggtcacaattcgaattgaacccgaca
tctttcccaggtctcatgaacactgtgttgagaacaaattacggcgccaatgttaatgct
tcccctccgaaaccctcggagtcaactaaaagcacgcaggagaacactaagatggatatc
aacaatgaactttgtagtgaaaatggtaatgaattggatggaatagttagcaattccaag
gagaggcaagaatctcaaggagggcttgaagttaagcttaaaaaggaagacaaggggttt
gatagtcgggtgatgtttaaagatttaggcgggttgagtggagtaatcaatgaagtgatg
gagattatttaccctctgtttcatccggagatttatccttggttgggagttcagcccatg
aagggcattttgttgcacgggccgcctggatgtgggaaaaccaaattggctcatgccata
gccaacgaggcaggtgttcccttctacaaaatttcggctacggaagtggtctctggagta
tcaggtgaatctgaagagaatattcgtaatttgttttcaaaagcattaaaaacagcacct
gcaataatattcatagatgagattgacgctataagtgccaaaagagaaaatttgcagagg
gaaatggagcgtcgtattgtggtacaacttttgacctgcatggatgaatcacatgaaacc
atgatatctgctgaccaagaatctgatgcagaaacacctaaaaagaagtcaggccatgtt
ctagtgattggggctacaaatagacctgatgctctagatcctgcacttcgaaggcctggt
cgctttgatcgtgagattgttctaggtgttccagatgaaaattcaagagtagagatcttg
tcagtaattacaagaggattaagactagaaggttcgtttgatttcaagaaaattgcaaaa
tgcacacctggttttgtaggtgcagacttgacagcattaaccagggaagcggcatcagtt
gcaataaagagaataatagcgagcaggaatcctcaaaatctcgtaaaatgtggggatata
gaggttactgaatatgcatggtggaaaaaggcgtggacacaagatgaaatgaacaatctt
agtattacaatggcagattttgaggaagctgcaaccaaggtgcaaccatcaactcgaagg
gaaggattttctgccatcccaaatgttaaatgggatgatgtgggggctcttagttctctg
cgcaaggattttgaaatgtatgttgttaggcggatcaagcacccagaggaatatgaggca
ctcggaatggatctggataatggatttttgctttatggaccaccgggttgtggtaaaact
ttggttgcaaaggctgtagccaatgaagctgggtctaactttatacacatcaagggtcca
gaacttctaaacaaatatgttggagaaagtgaacttgcaatccggacaatttttactcgt
gcacgtacttgctccccttgcatacttttctttgacgagattgatgccttgactaccaaa
cgggggaaagatggtggctgggttgtagagcgtttgttgaatcagcttctcatagagatg
gatggatcagaaaagcgcaagggtgtttttgtaattggagcaacaaatcgtccagaagta
atggatccagcagttttacggccaggacggtttggaaagctactttatgttccgatacca
gatgcagagggaagagtttcaatattgaagacccttactcgaaagcgacctctttctgca
gaggttgaccttaattacattggtcatagtcagtcttgtgagaacttcagtggtgctgat
cttgccgctctagttaatgaagcttgcatgtgtgcattgcaagagaaaattgcagcagca
gtggaggctgattcagatgttaggaagtatgctttggtggttaatttatcacactttgag
caagcattcaagagagttgtgccttcagtgtctaaagtgcaacggcattattacgaacaa
gtatttcaaaagtttatggggctgactggaaaacaataa
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