Cryptomeria japonica (Japanese cedar): 131039483
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Entry
131039483 CDS
T10556
Name
(RefSeq) serine/arginine-rich splicing factor RS31
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131039483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjf03041
]
131039483
Spliceosome [BR:
cjf03041
]
Common components
Common spliceosomal components
SR proteins
131039483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RRM_Nup35
RNA_bind
DUF2129
Motif
Other DBs
NCBI-GeneID:
131039483
NCBI-ProteinID:
XP_057828246
LinkDB
All DBs
Position
9:663645666..663651868
Genome browser
AA seq
299 aa
AA seq
DB search
MKPVYCGNLEYGARHSEVERLFSRYGRVDRVDVKSGFAFIYMDDERDAEDAIRGLDKTEF
GRQRRRLCVEWTKQADRGSHRSENGKRSSRNLKPAKTLFVINFDPANTMVRDLERHFEPY
GKVLNVRMRRNFAFIQYESQKEATKALNSTDNSKVLDKVISVEYAQRDDGDRGSYGRSAE
NRDRSLSPKYDRRPVRGSPDYGRATSPVNARRPERDSPDYGRAASPVNARRPERDSPDYG
RAVSPINARRAESGSPDYGRAASPVYPRRYGRVSPGYARASSPIHERYRSRSPLKRSRS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgtgtattgtgggaacttggagtatggggctcggcattcagaggttgagcgt
ttgttttccagatatggaagagttgacagggtagatgtcaagtcaggctttgcttttatc
tacatggatgatgagcgtgatgcagaggatgccatcagagggctggacaaaacagaattt
ggcaggcagagacgtcgactgtgtgtggagtggacaaagcaagcagaccgaggtagtcat
cgctctgaaaatggcaaacgatcttcaagaaatttgaaaccagcaaagacattgtttgtg
ataaattttgatcctgctaatactatggttagggaccttgaaagacattttgagccatat
ggaaaggtgctcaatgtaaggatgaggaggaattttgctttcattcaatatgaatcacaa
aaagaagcaacaaaggctttgaattccactgacaacagcaaggtgttagataaggttata
tctgtggagtatgctcagcgtgatgatggtgataggggaagttatgggcgctctgcagaa
aatcgtgatcgatctttaagtcctaaatatgatagacgtccagtgaggggcagccctgat
tatggtagggctacaagtcctgttaatgcacgacgcccagagagggacagtcctgattat
gggagggctgcaagtcctgttaatgcacgacgcccagagagggacagtcctgattatggt
agggctgtaagtcctattaatgcgcgacgtgcagagagtggtagtcctgattatggtagg
gctgcaagtcctgtttatccgcgacgctatgggagggttagtccaggctatgccagagct
tctagccctatccatgaacgataccgaagccgatcacctttgaagcgatcaagatcctga
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