Cryptomeria japonica (Japanese cedar): 131039553
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Entry
131039553 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131039553 isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03460
Fanconi anemia pathway
cjf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131039553
09124 Replication and repair
03460 Fanconi anemia pathway
131039553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131039553
03400 DNA repair and recombination proteins [BR:
cjf03400
]
131039553
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131039553
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131039553
DNA repair and recombination proteins [BR:
cjf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
131039553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_C
FANCL_d3
FANCL_d2
FANCL_d1
PHD_NSD
zf-RING_2
RWD
Alpha-amylase_C_2
zf-RING-like
SLX1_C
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
131039553
NCBI-ProteinID:
XP_057828324
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All DBs
Position
5:complement(672878655..673062337)
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AA seq
377 aa
AA seq
DB search
MEPTLLPLNAEMTAFYTFFSVHGREFSFNIVNVPQSSQGQKVSLKNAKLEGDSELRSLLA
GLEPLVQQRLNQSIDVGSFVLEMKDILEHVAGDVKTKFSLPSADFYRRVYSEIEVVGWEH
VVHLGEDLASVHFRVFDEGAREHVLEITLPSKYPQVEPAVSSELPSMFELQWSNESTLRD
VLNQFNELIKKFQDFWHVMEDIDMNVWVMEPLHPSRASSFRRIALGGHCSLSLTVNAFLA
RFVPECRFFGSDLVIAPLRKKWNSNIGRWKADRLLRENLEDVLEITFPSPQDSIQEDISA
ECGICYAFRLPNADGLGADRGCVPDRACDNPTCGRPFHSACLMEWLRSITTTRQSFDVFF
GNCPYCSHPIAVKTTAA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggaacccacattgcttcctctcaacgcggaaatgaccgctttctacacgtttttctca
gttcatgggcgggagttttctttcaatatagtgaatgtgcctcaatcttctcaagggcag
aaagtttccctaaaaaatgccaagttggagggagactccgagctcagaagtttacttgca
gggctagagcccttggttcagcagaggttaaatcaaagcatagatgttgggagttttgtc
ttggagatgaaggacatcttggagcatgttgctggagatgttaaaactaagttctctttg
ccatcggcagacttctatcgcagagtatattctgaaatagaagtcgtgggatgggaacat
gttgttcacttgggtgaagacttagcttctgttcattttcgtgtctttgatgagggagct
agagagcatgttttggagataaccctaccttcaaagtatcctcaagttgaacctgcggtt
tcttcggagttgccttcaatgtttgagttacaatggtcaaatgagagtactctgagagac
gtactgaaccaattcaatgagttaataaaaaaatttcaagacttctggcatgttatggag
gatattgacatgaatgtgtgggttatggagcctctacatccatcacgagcaagttcattt
cgacgtatagctttaggtggacattgctcgttgtcactgacagtgaatgcatttttagca
agatttgtaccagaatgtcgcttctttggatctgacttggtaatagctccactgcggaaa
aagtggaatagcaatattggacgatggaaagctgacagactgctacgggaaaatcttgag
gacgttctagaaataacgttcccttctcctcaagatagcatacaagaagacatcagcgca
gaatgtggaatttgttatgcgtttcggcttcctaatgctgatggtcttggagctgataga
ggatgtgtacctgatcgagcttgtgacaatcctacgtgtggtagacctttccacagtgca
tgccttatggaatggctgcgatccatcacaaccacccggcaatcttttgatgtttttttt
ggcaattgtccctattgctctcatcctattgctgtcaaaaccactgctgcatga
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