KEGG   Cryptomeria japonica (Japanese cedar): 131039905
Entry
131039905         CDS       T10556                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Pathway
cjf03083  Polycomb repressive complex
cjf04120  Ubiquitin mediated proteolysis
cjf04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    131039905
   04120 Ubiquitin mediated proteolysis
    131039905
  09126 Chromosome
   03083 Polycomb repressive complex
    131039905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cjf04131]
    131039905
   04121 Ubiquitin system [BR:cjf04121]
    131039905
   03036 Chromosome and associated proteins [BR:cjf03036]
    131039905
Membrane trafficking [BR:cjf04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    131039905
Ubiquitin system [BR:cjf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     131039905
   Cul7 complex
     131039905
Chromosome and associated proteins [BR:cjf03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     131039905
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     131039905
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB Transketolase_C Fijivirus_P9-2
Other DBs
NCBI-GeneID: 131039905
NCBI-ProteinID: XP_057828735
LinkDB
Position
7:12651526..12651969
AA seq 147 aa
MAKECKVRLKSSDDTIFEVEYAVAMQSQMLKNALSDTGTDGTVPLNNISSEIMAKVVEYC
AYHVNAANTISEKDVKIWDQEFVKDLDQATLFNLIMATQYLVIHNLQDLICQTVADRIKD
KSAEEVREIFNIQNDLTPEEEEEIRHI
NT seq 444 nt   +upstreamnt  +downstreamnt
atggcgaaggaatgtaaggtgagattgaagagttcggatgacactatttttgaggtagag
tatgcggtagccatgcagtcgcagatgttaaagaacgctctgagtgacaccggcacggac
ggcaccgtgcctttgaacaacatttccagtgaaataatggcgaaggtggtcgagtactgc
gcatatcatgttaatgccgccaacaccatctcggagaaggatgtgaagatatgggatcag
gagttcgtgaaggaccttgatcaagcaaccctttttaatctcatcatggccacccagtac
ctggttatacacaatcttcaagatttaatatgccaaactgtagcagacaggattaaggat
aaaagcgcagaagaggtcagagagatatttaacatacaaaatgacttgactcctgaagag
gaggaagaaatcaggcatatttaa

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