Cryptomeria japonica (Japanese cedar): 131040174
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Entry
131040174 CDS
T10556
Name
(RefSeq) protein transport protein SEC23 E isoform X1
KO
K14006
protein transport protein SEC23
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131040174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131040174
Membrane trafficking [BR:
cjf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
131040174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
131040174
NCBI-ProteinID:
XP_057829009
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Position
11:complement(346002830..346129046)
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AA seq
759 aa
AA seq
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MVFGEAEDGVRMSWNTWPATNAEASECVVPTAVVYTPLKELAQGAVLPYGPLRCTACRSA
LNPFVTVDFFGKTWACPLCSARNHFPQPYAALAPDHLPPELLPHHTTVEYVSSSPSASPP
VFLFVVDTCIPEDELGFLKAALTQAITLLPESATVGFISFGAHVYVHELGFSHIPKSYVF
NGAKHVSKDDILNYLNFFVNKNKPPVGIIAGVKDGLSAQSIARFLLPACQCEFTLNLVLE
ELQKDPWAAQTDARAARCTGPALSVAAGLVGACVPGTAARIMLFIGGPSTQGSGTIVSKD
LSESIRSYKDLNKCAAPYYQKAVEFYGEFAKQLVNQCHVLDVFACSLDQVGVAEIKVAVE
RTGGLVVLAESFGHSVFKDSFRRVFESKDHDLGLSYNGIFEVNCSRDVKIQGVIGPCASL
DKRGVSCSETVIGQGNTTAWKLCGLDKGTSLCIFFDIIPKELSGAAGQSNSNLFLFQLLT
YYQHSSGQMRLRTTTLARRWVNGHRSTEELVAGFDQEAAAVIMARLASFKMEAEDNFDAN
RWLDMSLIRLSSRFGVYEKNDPSSFSLSPTFANFPEFFFHLRRSPFVQVFNNSPDETAYF
RMILNRENVNNSIVMIQPSLVSYSLNAPPEPALLDVSAISTDQILLLDAYFTVVIFHGMT
IAQWRKAGFQNQPEHQAFANLLQLPQDDSDKILKERFPVARLVVCDQHGSQARFLLAKLN
PSATYNSDMGSPPGRDFIFTDDVSFQIYMEHLQKLAVQS
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttggggaggcagaggatggcgtgagaatgagctggaacacatggccggcgacc
aacgcagaagcttcagaatgcgtcgttcccacggcggttgtgtacacgcctctgaaggag
ctggcgcagggggcagtgctgccctacggtccgcttaggtgcacggcttgccgctcggcg
ctgaaccccttcgtcactgtggatttcttcggcaagacgtgggcgtgccccctctgctcc
gcccgcaaccattttccccagccttatgctgctctcgccccagaccaccttcctcccgag
ctactcccacaccacaccactgtggagtacgtttcttcttccccttctgcttcccctccc
gtcttcctctttgtggttgacacgtgcattccggaggatgaactgggattccttaaggcg
gccttaacccaggccattaccctcctgccggagagcgccacagtgggcttcatatccttc
ggtgctcatgtttatgtccatgagttaggcttctcccatattcccaagtcttatgtcttc
aatggggctaaacatgtcagcaaggacgacattttgaactaccttaatttctttgttaat
aaaaataaacccccagtagggatcattgcaggagtcaaggacggcctctctgctcagagc
atcgcccgattcttgttgccagcttgccagtgtgaattcactttgaatttggttttggaa
gagttgcagaaggatccgtgggcggcgcagacggatgcaagagctgcacgttgcactggc
cctgctctcagcgtggccgcggggctggttggggcttgtgtgcctggcactgctgccaga
attatgcttttcattggcggtccctctacccaaggttcaggcactattgtatcgaaagat
ttatcagagtcaatacgttcttacaaagaccttaacaaatgtgctgctccgtattatcaa
aaggcagtagaattttatggagaatttgctaagcaacttgtgaatcagtgtcacgttctg
gatgtttttgcatgttctcttgatcaggtaggagtggctgaaatcaaagttgctgttgaa
aggacaggtggacttgttgtgctggcagaaagctttggacattctgttttcaaggattca
ttcaggcgtgtctttgaatccaaagatcatgatcttggtttgtcatataatggaattttt
gaggttaactgctcaagggatgttaagatacagggtgttattgggccatgtgcttctctg
gacaagagaggagtctcttgctcagaaacagttattggccaaggaaatacgactgcctgg
aaattgtgtggtcttgacaaaggcacttctttgtgtatattttttgacatcatcccaaag
gaattatctggagcagcagggcaatctaatagtaatctgttcctttttcagttgctaaca
tattaccagcacagcagtggacaaatgcgccttcggactacgacactggctagaagatgg
gtcaatggtcacagaagcacagaggaattagttgctggatttgatcaagaagctgcagct
gttatcatggctcggctggcttcattcaaaatggaggctgaggataattttgatgcaaat
agatggctggacatgtctttgattcgcttgtcctccaggtttggagtttatgaaaagaat
gatccttcttcctttagcttgtctccaacatttgcaaattttccagagttcttttttcat
ttacgccgttctccatttgtccaggttttcaacaacagtccagatgaaactgcatatttt
cggatgatacttaacagagaaaatgtgaacaattcgattgttatgattcaaccatcattg
gtgtcctactctttaaatgcacctccagagccagctcttctcgatgtttctgccatttcc
actgatcagatccttctattagatgcttattttactgtggttatttttcatggaatgact
attgcacaatggcgcaaagctggatttcaaaatcaaccagaacaccaggcttttgctaat
ttgttgcaactacctcaagatgattctgataaaatactgaaggagcggttccctgtggca
cgcttagttgtctgtgatcagcatgggtcacaggctcgatttttgcttgcaaagttgaat
ccttctgcaacatacaattctgacatggggtctccacctggacgggattttatatttacg
gatgatgtaagctttcagatttacatggagcatctccaaaaattagctgttcagtcataa
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