Cryptomeria japonica (Japanese cedar): 131040307
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Entry
131040307 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131040307 isoform X1
KO
K08331
autophagy-related protein 13
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
131040307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjf04131
]
131040307
03029 Mitochondrial biogenesis [BR:
cjf03029
]
131040307
Membrane trafficking [BR:
cjf04131
]
Autophagy
Autophagosome formation proteins
ULK complex
131040307
Atg1 complex
131040307
Mitochondrial biogenesis [BR:
cjf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
131040307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
DMAP1_like
Motif
Other DBs
NCBI-GeneID:
131040307
NCBI-ProteinID:
XP_057829177
LinkDB
All DBs
Position
4:complement(598631190..598661154)
Genome browser
AA seq
612 aa
AA seq
DB search
MLINARMHCQGYGENSSRLPNQILSLQHNNLRLPVGISNGLWHKIIQNIKGKEKERRKVK
AEYTSVLSGGQPPNETPKKSKMDIKSKVDQIVRYLFVMSIQIILQSRIPVRGQSAAESTA
SPSSSSPKEIEEFPFNLALKKFPTDVAALEACKKNGFRSVVLDVLPIQSPQQQTEVSFRH
GKLQKFLKTVMSQQPDRRSVLERWVLQYVKHEDGQNAEKQTYSMERMIARVYKSTMVLMR
SLISMTRLLPAYRAFQLANTSSYGKFFGLWYQFLQLPQPLLHGEGTHMNSYKFPSINVPF
GKICLSVDYRSLVASDFNFPSAPRLPKIVPDYYRGGSTTDPVKILSDDCYSKNMMLNFGG
SLPLTGSALSAPPSDSYRNEDSNYCKFATTSLRHSYIQRALQTIPLSRSRSCRCMAFSPL
KQLHCDVLCTKQTERVPRTFPVDKSALMFSGAYDYCREVEVAASLPFAVDNDSSVNSLSS
LASRQSAQINETMAKEADTIQIPRDAAIGALVELLNSAPPLRQFTASESSGDLKLSRPSF
EKDGDIHTRSCKAHTSGFPVENSCLKLSNSLKQGMTSSSSKTTVGQALKELDVLKGIKNQ
ILKEKDNNRNQI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttgattaatgcacggatgcattgtcagggctatggagaaaactcttcacgccttcca
aatcagattctctctttacaacacaataacctgcgccttccagttgggatttccaacgga
ttatggcacaaaattattcagaacataaaagggaaggaaaaggaaaggagaaaagtgaaa
gcagagtacaccagcgtgctaagtggaggacagccgccaaacgaaactccaaagaaatca
aagatggacataaaatccaaagtcgatcagattgttcgatatctctttgtgatgagcata
caaattattctgcaatccaggatacctgtgagaggacaatcagcagcagagtctacagcg
tcaccctcctcttcttctcccaaggagatagaagaattcccttttaatctagcattgaag
aaatttcctacagatgtggctgctctagaggcttgcaagaaaaatgggtttagatcagtt
gttttggatgttctccctatacagtctccgcaacaacaaactgaagtaagctttaggcat
ggtaagctacaaaaattcttgaagacggttatgtcacaacaaccagaccgtaggagtgtt
cttgaaagatgggttttgcagtatgtgaaacatgaagatgggcaaaatgcagaaaagcaa
acatatagcatggagaggatgattgctagagtgtacaaaagtacaatggtattgatgcgt
tctttaatttccatgacaaggcttttgccagcatatcgagcctttcaacttgctaatacc
tcatcctatggcaagttctttggtctctggtatcagtttttgcaattaccccaaccccta
ttgcatggggagggaacccatatgaattcctataaatttccatcaatcaatgttcccttt
ggaaaaatatgcttatcagtagactaccgttcccttgtggcttctgatttcaattttcca
tcagcaccgaggctaccaaaaattgtgccagattattataggggtggctcaaccactgat
ccagtgaaaatattatcagatgattgttacagtaaaaatatgatgctgaattttggtggt
tctcttcctttaactggaagtgcgttgtctgcccctccttctgacagctacaggaatgaa
gattcaaactactgcaaatttgcaactacaagtctgaggcattcatacatacaaagagct
ttacaaacaatccctctgtctcgcagcaggtcatgtaggtgcatggcgttctcaccgctg
aaacagcttcactgtgatgtactgtgtaccaagcaaacagaaagggtaccaagaacattc
ccagtagataagtctgcactcatgttttctggagcttatgattattgcagggaagtggaa
gttgctgcatctcttccttttgcagttgacaatgacagcagtgtgaattcattgagcagc
ttagcttcaagacaaagtgctcagatcaatgaaacgatggcaaaggaagcagacacaatt
caaattccaagggatgctgcaattggagcacttgtggaactcctcaattctgcacctcct
cttagacaattcacagcatcggaaagctcaggagacttgaagttgtctagaccatcattt
gagaaggatggagatatacacacacgttcttgcaaagctcacacctctggattcccagtg
gaaaattcatgccttaagctgtcaaattctctaaaacagggaatgacaagttcaagttct
aaaactacggtaggccaggctctaaaggaactagatgtcttaaagggtatcaagaaccag
atattaaaagaaaaggacaataatagaaatcaaatctga
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