Cryptomeria japonica (Japanese cedar): 131040314
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Entry
131040314 CDS
T10556
Name
(RefSeq) mRNA-decapping enzyme subunit 2-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131040314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjf03019
]
131040314
Enzymes [BR:
cjf01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
131040314
Messenger RNA biogenesis [BR:
cjf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131040314
mRNA degradation factors
5'-3' decay
Decapping complex
131040314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
PH_SLA1
Motif
Other DBs
NCBI-GeneID:
131040314
NCBI-ProteinID:
XP_057829188
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All DBs
Position
4:598934255..598935685
Genome browser
AA seq
476 aa
AA seq
DB search
MSAFGSIPSIRKRSNYVPSPKLQDKMLDPPPQWRKCSLPQTPNSKGVISGIVGSAPMTPN
SKCRISRSRSRMERNSSRSSTSFGYLYPSEETMKELYVNFVQDMNPEEVDFMPSLMFQVE
QAHWHYEDNIVDQDPRLKSLSIKDFTFIFFKSCDPFKIYHANHVDDILDEFKAFKHSVPV
AGSIILDQSHQRCLLVKGWKSNSWSFPRGKREDPDEKDHICAIRETMEEVGYDISSLLNI
NDLIEYSEEKKRVVLYIIRGVDEKYPFEPRTKKEVSEIAWHPLQIMGKKRNKYFMVGPFL
HKLEKWIKRNHMTSSTTPLSEIGEICTIWKADKEQMNSTPRRFSVTPNVKINTPNPFQMG
PSTPCRELQNSTSNSAQKRPSTPSWSKSNLNNCGQRRSSNHCWNSQTSSPYSNSSRYHYP
KTEPINSPYPPRSITSPYPPRSPNSSTYSSTSPYPKYRTPHHRRMEASDASSRLRW
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcatttggaagcatcccctccattcgtaaacgttcgaattatgttccttcccca
aaactccaagataaaatgttggatcctcctccccaatggcgaaaatgctctcttccccaa
actccaaatagtaagggtgtcatttctggtattgttggctctgcaccaatgacacccaac
agtaagtgtaggatttctcgatctagatctagaatggaaagaaattccagtaggagtagc
acatcttttgggtatctttatccttcagaggagaccatgaaagaattgtatgttaatttt
gttcaagatatgaatccagaagaagtagacttcatgccaagcctaatgtttcaagtagag
caagctcattggcactatgaggacaatatagtagatcaagatcctcgtctcaagtccctt
agcataaaggacttcacatttattttctttaagagttgtgatccatttaaaatttaccat
gctaaccatgtagatgatatacttgatgaattcaaggcctttaagcactccgttccagta
gcaggctcaataattttggaccagtcccatcagaggtgtttgcttgtgaagggctggaag
agtaattcttggagttttcctaggggaaagagggaagatcctgatgaaaaagatcacata
tgtgctattagagaaaccatggaggaggtaggatatgatataagctcacttttgaatatc
aatgacctcattgagtattctgaagagaagaaacgagtggttttgtatattatcagagga
gtggatgagaaatatccttttgaaccaaggaccaaaaaggaagtgagtgaaattgcttgg
catccactccaaatcatggggaaaaaacgtaacaagtattttatggttggcccatttcta
cacaaattggagaagtggattaaaagaaatcacatgacctcatctacaacaccattgagt
gaaattggtgagatatgcactatttggaaagctgataaagaacaaatgaattcgactcca
aggaggttttctgtaacacccaatgttaaaattaatactcctaacccttttcaaatgggt
ccttcaactccatgcagagagcttcaaaatagtacctctaattctgctcaaaagcgtcct
tccactcctagttggagtaaaagtaacctcaataattgtggtcaaaggcgttcttccaat
cattgttggaattctcaaactagttctccttattcaaatagttctagatatcattatcct
aaaacagaaccaattaattctccttatccacctagatcaattacttctccttatccacct
agatctcctaattcaagtacttattcaagtacttctccttatcctaaatatcgtacacct
catcatagaagaatggaggcttcagatgcatcttcgcggttaagatggtag
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