Cryptomeria japonica (Japanese cedar): 131040353
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Entry
131040353 CDS
T10556
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Pathway
cjf00040
Pentose and glucuronate interconversions
cjf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131040353
Enzymes [BR:
cjf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131040353
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
131040353
NCBI-ProteinID:
XP_059064212
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All DBs
Position
1:complement(71538906..71542473)
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AA seq
402 aa
AA seq
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MDPALAFRLLILLALRAPPCKGNPMNVSYVSSRLRPGWNGSDDRGSLRGDNTRIMNEIDA
CWRNDPNWAAHRKSLADCGIGFGSRATGGKYGEIYIVSDEGDDAVNPKYGTLRYAVIQTR
PLWIIFKRDMLIKLKSELIVNSFKTIDGRGVNAEIGHGACITVQFVSHVIIHGLNIHDCV
PAKPAMVRSSPSHVGHRLATDGDAIDIFGSNNIWIDHCTFSNCKDGLIDAVHSSTAITVS
NCHFYHHDKVMLLGHNDGYNADKIMRATIVFNRFGPNLVQRMPRGRFGYFHVANNDYHAW
ESYAIGGSANPTFRSEGNRFIASDNPYTKQVTNREAGGGSGWKWRSVNDMFVNGAYFVPS
GKGTCAPYYSSNERFKVYEAALVPFLTADAGRLKCRVGYPCN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggatccagcgttggcatttaggcttctcattctactggctttacgtgcccctccatgc
aaggggaatcctatgaatgtctcctatgtgtcctctcgtctcaggcccggatggaatggt
agcgacgacagaggatctttgagaggagacaacaccagaataatgaatgaaatcgatgct
tgctggagaaacgatccaaattgggcggcccatcgcaaatcattagccgattgtggcatt
ggctttggaagccgtgcaacgggaggcaagtatggcgaaatatacatcgtaagcgatgaa
ggggacgatgcagtaaatccaaagtacggcacccttcgttacgcagtgattcaaaccagg
cctctctggatcatcttcaaacgggatatgttgatcaagcttaaaagcgagctgattgtc
aacagtttcaagactattgatgggcgaggagtaaatgcggagattggacatggagcatgc
atcacagtgcagttcgttagtcatgtaataatacatggtctcaacatacacgactgtgtt
cctgccaagcccgccatggttcgaagctcaccatctcacgttggtcacagacttgctaca
gatggagatgccatcgacatcttcggttcgaataacatctggattgatcactgcaccttc
tcgaattgtaaagatgggcttatcgacgcagtacactcatccactgcaatcactgtttca
aactgccacttttaccatcatgataaggtaatgctgcttggccacaacgacggctataac
gctgataagattatgagagctacgatagtctttaatcgtttcggcccaaatttagttcaa
cggatgcccaggggacgattcggttactttcacgtagccaacaacgactaccatgcttgg
gaatcgtatgcgattggaggcagtgcaaatccaactttcagaagcgagggaaaccgattc
atagcatctgataatccctacacaaagcaggtaacgaacagggaggcaggcggagggtca
gggtggaaatggagatcagttaatgatatgtttgtgaacggggcatattttgttccgtct
ggaaaggggacgtgtgctccatattattcttcgaatgaaaggtttaaagtgtatgaagct
gcactggttccttttctcacagctgatgcaggtcgtctgaaatgtcgcgtgggataccct
tgcaattga
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