Cryptomeria japonica (Japanese cedar): 131040430
Help
Entry
131040430 CDS
T10556
Name
(RefSeq) paired amphipathic helix protein Sin3-like 6
KO
K11644
paired amphipathic helix protein Sin3a
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjf03036
]
131040430
Chromosome and associated proteins [BR:
cjf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
131040430
REST complex
131040430
Heterochromatin formation proteins
Other heterochromatin formation proteins
131040430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3_corepress
PAH
PAH_ZNF598
DUF4939
Motif
Other DBs
NCBI-GeneID:
131040430
NCBI-ProteinID:
XP_057829315
LinkDB
All DBs
Position
10:complement(218015480..218019804)
Genome browser
AA seq
714 aa
AA seq
DB search
MKRAAEKEKEKSDSRRSKRIRFAEGCDEDLRLPLEIVEAQSYLILVKEHFKNDRGKYAGF
IQILNDFRSKTCDTIGVITRLKKLFKGHKLLLSFNKFLPRGFEILFPLKDFIRKKHQVQL
EEAVIYIRKVKTRFENEEYIRKGFFEMLTGYMKGNVKINDIHTEVKSLFCDHQDLVDEFA
YFLPSSTSSDLILTCVKDSQREDIGKQGQKYLTLNNNCPQSFQFALEKDVEGTSDAIVNE
HPKKGEKEKELKEGWQRKEEEDRGEKRPPHNMESELYVMDQHSHGRRNLIDNNQQRLDFF
EKVKATIGNVAYREIMKCINMYNTKVINSEHLQCLAVSILGKCPEVVDEFNEIISQSTTG
KDGEEECTKHDNMEKEKEKYRNFDVVLEKENERTKETGCEENKENERKEENDREEDKDRH
TDPHHKSKVVVIENERKEEKDREEDKDRHKDPHRKSKVVVIENERKKEEDSEEDIDGHKD
QHKKSRAILDDNAFPDSNNGKITYQPMSEMDLSHLEQCTPSYRLLPQNFVKPIASCSTGL
AAEVLNDICVSVASGTEDYRKQKQINPYEEAIFICEDDRFELDMVIKNSEAAIKRIHELL
EKIHDNTSQTNADFRIEDHLTAMNLRCIELLYGDFGLNIMDLLRETPDLCLPVIVKRLQQ
KHDEWVDCRTRYNIVWADVYAKNYQKSLDHHNSCFKQRDTKSLSRKRIRTHIHL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagcagcggaaaaggaaaaggaaaaatcagacagtcggagatcaaaacgtatt
aggttcgctgaaggttgtgatgaagatctgcgtttaccgttagaaatagtcgaagcacaa
tcgtatctgattttagtaaaagagcatttcaagaatgacagaggaaaatatgcagggttt
attcaaatcctcaatgattttaggtcaaagacatgtgatacgattggggttattaccaga
ttgaaaaagttgtttaagggccataaacttcttttaagttttaataagttccttccaaga
ggctttgaaatcttatttcctctcaaagactttatacgcaagaaacaccaagttcagctt
gaggaagccgtgatatatattcgaaaggttaagacgcgcttcgaaaatgaagaatatata
cgcaagggattctttgagatgcttactgggtatatgaagggaaacgtgaagatcaatgat
atacatacagaggtgaaatcgctattttgtgatcatcaagatcttgttgatgaattcgcg
tattttctaccttcctccacaagttcagatcttatattgacttgtgttaaagattcacaa
agagaagacataggcaagcaaggacaaaaatatttaactttaaataataattgccctcaa
agctttcaatttgctttggagaaagatgtggaaggaacatctgatgctatagtgaatgag
caccctaagaagggagagaaagagaaggaactcaaagaaggttggcagaggaaggaagaa
gaagataggggtgaaaaaaggcctccacataatatggagagtgaattatatgttatggat
cagcattctcatggtagaaggaatttgatagacaataatcaacagcgtttggactttttt
gagaaagtaaaagcaactattggaaacgttgcatatcgagaaataatgaaatgcatcaat
atgtacaacacaaaagtaatcaactcagagcatttgcagtgtctggcagtttccattctt
gggaaatgtccagaagttgtggatgaattcaatgagattatttctcaaagtacaactggg
aaagatggagaggaagaatgtacaaagcatgataacatggagaaggaaaaggaaaaatac
aggaatttcgatgtggtgctggagaaggaaaatgagagaacgaaagaaacaggctgtgaa
gaaaataaagaaaatgagagaaaggaagaaaacgacagggaagaagacaaagacagacac
acagatccacatcataaatcaaaagtggtggttatagaaaatgagagaaaggaagaaaaa
gacagggaagaggacaaagacagacacaaagatccacatcgtaaatcaaaagtggtggtt
atagaaaatgagagaaagaaagaagaagacagtgaagaagatatagatggacacaaagat
caacataaaaaatcaagagcaatcttggatgacaatgctttcccagattcaaacaatggg
aaaatcacataccaacccatgtcagagatggacctttctcatttggagcaatgtactcct
agttaccgtttgctaccacagaatttcgtgaaacccattgccagctgttcaactggtctt
gcagcagaggtattgaatgatatctgtgtatcagtagcatctggtacagaggattaccga
aaacaaaagcaaatcaacccctatgaggaggccattttcatttgtgaggatgacagattt
gagttggacatggtgataaagaattcagaagctgcaattaagcgtatacatgagttactg
gaaaagatacatgacaacacaagtcagacaaatgctgatttcagaattgaagaccacctg
acagctatgaatttaaggtgtattgagctcttgtatggtgattttgggcttaatataatg
gatctgttacgtgaaacgccagatctttgtttaccagtaattgtaaaacgacttcagcaa
aagcatgatgaatgggtcgattgtcgtaccagatataacatagtttgggcagatgtttat
gcaaagaactatcagaaatctctcgaccaccataactcctgctttaagcaaagagataca
aaaagtttgagccggaaaagaataagaacccatattcatttatga
DBGET
integrated database retrieval system
