Cryptomeria japonica (Japanese cedar): 131040449
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Entry
131040449 CDS
T10556
Name
(RefSeq) uncharacterized protein LOC131040449 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjf01002
]
131040449
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131040449
Enzymes [BR:
cjf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131040449
Peptidases and inhibitors [BR:
cjf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131040449
Ubiquitin system [BR:
cjf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131040449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
DUF3517
UCH_UBL1
ubiquitin
TilS-like
Motif
Other DBs
NCBI-GeneID:
131040449
NCBI-ProteinID:
XP_057829361
LinkDB
All DBs
Position
6:125814789..125885143
Genome browser
AA seq
2539 aa
AA seq
DB search
MEKGRDRHADNDKGQDRHNVNNRSDKNSESDRNNENVNNKGRERHDENEDDKVRERHNEK
EEVEPWESVSASEDEEEESSAGEFDGQDMVMMPQAEVEADEGYIVLEFPRREFNSVLEGI
QRIPWTVFPRHLIELINYACKVLSMGVEVHSDLHKLQILYRELIPASFERCLDDKALWRW
NNDLQLQIFQAAECLVELVVAKLGQLQLLRFTDSYVMDDLLPLLQTLSLAFDKHCQFHIK
HKESSTPAMAIERWKYAKPLAGALVKQKNGEWFCMRRKCQVTEAEDCDCERCKPPNVFCV
IAHLMNHFGQSTHGNGYKLAAAVLCSPLKLFPAIIEALLLPLARAVEFMTDEVADILLEP
CDIVLKHVANCLDRDVDALSDRTRSDAFGTLSMILKHLQVIISRCLSGEKAENVVSMVQR
RMVEKMLGFQSFNKQLCAVREINKLLENARAIASRDNGKSISTAIEWLERKNILRLILRS
NLHHKQYVDQIQNIMRLLLLEHRLSEEHLDAIWAATEKPDQIEAVKTNVFDLIADLAWSF
SDEQLDSLFRRLKNVQGRSVGDVVKILGFLKKLARSDNRGIMAERLLELLWNMMYTEEAL
DEVLESGAFIEILGHYISVDRASQDVYILQCLSKVKVGEFVIPSLRLLREIICLDNEKPF
YRGQVSRQMRLQQLITDHNLIHLVVNSLVEYISVARVVCSKKTLDSEVSNDHFTHDEDIK
ERLSFLQFALQSGNALLPWESSEMLWKCLVETPTYSADKESGLQWFSEVLEKHALSVDSL
ENLLTKKITKVCPVSMSQTAWRSFQLLFVQVNLSKKKLKQVRHEDVVINDLDLVGLPYLW
QIALQARNENIVEESINMLRDIHTSLAESLQQELTTIRQNFIDECMEHLMHAMATGSTWT
HIKDVKDNCILGGQKPTSDISPTLDMAKEDKASERYVDLQASASINKEEMLSTVLTTGST
EDAMKCTPKMDQVERCLRLLKIFIVKCEDSFARTVPAHGASFKGRPYVVVVYVSTASGKQ
STRFEIMVHSNECLGSLRAKVAKLLECKPSRIRLIYHDRELTQDSLVLWHCDVTGESPIC
ASVNAVDHNIKVMDEQQLPGILISKNTQIYDILFELANTTNIGVREGANGLLALLPTHPV
LLADFKGLHQRNKTEAQELLQTQFAANSHLLYTLQILDGIVMPVTHSSDEHTLDFRKCFL
KYGGLQYVLTVFEPGKLAPGVDDHTRRGCYSSGLRLLKILLLENKIETRAGADGHLTGFV
RAEASHVVKDNVFDSQGEVMITENDNVNVCSDAENSEVEIIDMAQVIRILKWLAWASALG
KLSEMEANPVNNLHFKNRPQSTNNKIGGVCKDGLDLDDQYVAVEALELLVALLLRDENPR
NSFFVTPDTKTFIVGMLLYPLDEYLRYRAAMLFLKLGAFQSHSGDKKRPLRRNILDALIE
AKEEASNHKRSCLHFWELLGQLFYGIEDPEEHNLAQNQLKEELLWLETAPAAVDEEDKLM
EGHLILTRVLVEILDCRIIGSSKGPYGQSLVHKLVSTFLFPESTFLWHDEATNGNNRPTG
VQFGILGTSGDNERVLQSKCGTRGSRDKAFDLLICLATHCTESLHELVELLIKIHFTDEL
VDWEQPSSYGQKTVGGYVGLKNGGATCYMNSVFQQLFMQPEVRKTVLGCIECADAEKKNS
VLFQIQAMFGALLGSSLDHYTPQGFWGAFRNPDGMPINIREHQDAFEFFNRLYDAIDETL
KTYHPEATLAKIFGGIFAQQIICRGCPHKSEKEEAFAAISVDVKNKKNLLESLESFVQGD
LLEGEDAYLCEKCNKKFDALKRTCVKSLPNTLVIHLKRFDFDYETMQQLKLKDRFEFPIH
LDMKPYTVEGLALRESQSQGIGNSERSAVNEGSQGDLSDLRSDSYYQYDLVGVVVHSGTA
FAGHYYSYIKERPGDGLLNGRKAGTGGYVADAKWWMSFDDKQVQPYDLKNLERDCFGGKY
TMDVYDNFLKTNAPQEYDKPNSAYMLLYERSRSEVKCMCAPLDSPAGSITSDGDGDALMK
EMQQMGPLEKSTYIEMPPSIHYCVWRENLKFVHEMHLLDKDYFQFLLRLVETNIDLIDKR
NCTKQLVNGQHGTRAVLMTDAIRDEFTKLNTILATKFLFTVYMHTHQNLRDDLNHWKALL
FKMFECSPVASNSYISTMVKQPNWLFEYLMKCPIEEIKQVFVTLLVQALRCAVKFLHDPL
YPDFCVSSGFHIDDLIDVLLAFLKDGAMLECNLHKYFEVIMEYARLGPDQRKHLLQKMIF
SRLIGFTTKVNLQVAKSDITYLHSIVSLLLRSCDTSGLNNDAEQRMVLPNPLQLPGQTIP
LPKDAEEAIFKHRVYTNILIDTCADQEEAIKLLKFCSWQNQAFSVCLLQDIMELVHRSLD
NEINDLLHLLMELLLLNDSLQLSRQEITLLGFENFPLGIMDLLTTQDRMSSQKRYTLIKF
VVKLVAQSPDTRLLLLGKQVEWMRVVEWLQDQLQTTGVSLPISGSRVSSENPSRSRLQRT
NTADHTLLLARKLFNTSES
NT seq
7620 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggacgggacagacacgccgacaacgataaggggcaggacagacataatgtc
aataacaggagtgataagaatagtgagagtgacaggaataatgaaaatgtgaataataag
ggacgggagaggcacgatgagaatgaggatgataaggtgcgggagaggcacaacgagaag
gaagaggtagaaccctgggagagtgtttctgccagtgaagacgaggaagaagagtcatct
gctggggaatttgacggccaagacatggtgatgatgcctcaggccgaggtggaagctgat
gaaggatacattgtattggagtttcctcgccgtgagttcaattctgtgctggaagggatc
cagaggataccgtggactgtctttcctcgacatctgatcgaacttatcaattatgcttgt
aaggttctgagtatgggtgtcgaggtgcattctgatctgcacaagttgcagatattgtac
agagagttgatcccggcctcttttgagagatgtcttgatgataaggcactttggagatgg
aataatgatctgcagttgcagatatttcaggcggcagagtgtttggtcgaattggtggtg
gctaagctcgggcaattgcagttgctgaggtttaccgatagttatgtaatggatgatctg
ctaccccttttgcagactttgtcattggcatttgataaacattgccagtttcatatcaag
cacaaagaaagctcaactcctgctatggcaattgagaggtggaagtatgcaaaacctctt
gcaggagcccttgttaagcagaagaatggggaatggttctgtatgcgaaggaaatgccag
gttactgaagcagaggattgtgactgtgagcggtgtaaaccacctaatgtgttctgtgtg
attgcacatctgatgaatcattttggtcaatctacgcatggaaacggatataagctggca
gctgcagttctctgttccccactcaaattatttcctgccattattgaagctcttttgctt
cctcttgcaagggctgttgaatttatgacagatgaggtagcagatattcttttggaacct
tgcgatattgtgctcaaacatgtagccaattgtcttgatcgggatgtggatgcactgagt
gacagaacaaggagtgatgcttttggtacactatctatgatcttgaaacatttgcaggta
ataatttctcgctgcttgtctggtgaaaaggctgagaatgttgtcagcatggttcaaaga
agaatggttgaaaagatgctaggctttcagtccttcaacaaacaactctgtgcagtgcga
gaaatcaataagttgttagaaaatgctcgtgccattgcttccagggacaatggaaagtca
atttctacagctatagagtggttagaaagaaagaatattcttcgcctcatcttaagatcc
aatctacaccacaagcaatatgtagaccagatccaaaatatcatgaggcttctcttgttg
gaacatcgtctgtcggaagagcacttagatgccatttgggctgctactgagaagccagat
caaattgaagcggttaaaaccaatgtctttgacctcattgctgatttagcttggtcattt
tcagatgaacaattggacagtctttttcgcaggttgaagaatgtacagggtcggtctgta
ggcgatgttgttaaaattcttggtttcttgaagaagcttgcacgaagtgacaacagaggt
atcatggcagaaagattgcttgagttactttggaatatgatgtacacagaagaggcacta
gatgaagtgctggagtctggagcctttattgaaatccttggtcactatatctcagtagac
cgtgcaagtcaagatgtttacatcttgcagtgtctttcaaaggtcaaggttggagaattt
gtgattccttcactcagacttttacgggaaatcatttgtttggacaatgagaaacctttt
tataggggtcaggtttcacgccagatgcgtttacagcagctaattacagaccacaacttg
attcatctggttgtcaacagccttgtggaatatatttctgtggcacgtgtggtttgtagt
aaaaaaactctcgattctgaagtgtctaatgatcatttcactcatgatgaagatattaag
gagaggctcagttttcttcagtttgcattgcagtctggaaatgctctattgccatgggaa
tcttctgaaatgctatggaaatgcctagttgaaacaccaacatattctgctgacaaagag
agtggtttacaatggttttctgaagttttggagaaacatgctttatctgttgattcatta
gagaatttgctcactaaaaagatcactaaagtctgtccagtatctatgtcacaaacagcc
tggaggtctttccaactattgtttgttcaagtaaatttaagcaagaagaaactgaaacaa
gttcgacatgaagatgtcgttataaatgatctggatcttgtagggttgccatatttgtgg
cagattgctcttcaggcaagaaatgaaaatattgtagaagaaagtataaatatgttgaga
gatatacatacatccttggcagaaagtctacagcaggagttgactaccattcgtcaaaac
tttattgatgagtgtatggagcatcttatgcatgctatggctactgggtcaacctggaca
catatcaaggatgtgaaagataattgtatattgggtggccaaaaacccacttcagatatt
tctccaacattagatatggctaaagaggacaaggcatcagaaagatatgtagatcttcag
gcttcagcgagtataaataaagaggaaatgctttcaactgtactgacaactggttctaca
gaagatgcaatgaaatgcacaccaaaaatggatcaagttgaacgttgtctgcggcttttg
aagatttttatagttaaatgtgaagacagttttgcaaggacagttccagcccatggtgct
tcttttaaaggaaggccctatgttgtggtggtatatgttagcactgcatctggcaaacag
tcaacgcgttttgagatcatggttcattctaatgaatgtctgggttcacttagagcaaag
gttgcaaagttacttgaatgcaaaccttcacgcattcgcctcatttatcatgatagggag
cttacacaggattcattggtcctttggcattgtgatgtaactggtgaaagtcccatatgt
gcttcagttaatgcagtagaccacaatataaaagtgatggatgaacagcagctaccgggt
attttgatttcaaagaacacacagatttatgacattctctttgagttggcaaacactact
aatattggtgttcgagaaggtgcaaatggcctgctagcattgctaccaacacatcctgtt
ctgctggcagattttaagggcttgcatcaaagaaataaaactgaagctcaggagctatta
caaacacaatttgctgctaactcacaccttctttacactttacagattctagatggtatt
gtcatgcctgtaacccattcctccgatgaacatacacttgatttccgtaaatgctttctg
aaatatggaggattacaatacgttttgactgtgtttgagcctggaaagttagctccagga
gtagatgatcacacaaggcgtggttgttactctagtggtttgaggcttttgaagattctt
cttctagaaaataagattgaaactagagctggtgcggatggccatcttactggatttgtc
agggctgaagcaagtcatgtcgtgaaagataatgtgtttgattcacaaggcgaggtcatg
attacggaaaatgacaatgtcaatgtttgtagcgatgcagagaattcagaggttgagatc
attgacatggcacaagttattcgaattttaaaatggttggcatgggcttctgcactcggc
aaactttcagagatggaagccaatcctgtcaataatttgcatttcaaaaacaggcctcaa
agtaccaacaataagataggtggtgtgtgtaaagatgggttggacctagatgaccaatat
gtggctgttgaggccttggaacttttggtggcattgttgttgagggatgagaatccaaga
aattcatttttcgtaactccagatacaaagactttcattgtgggcatgctgttatatcct
ttagatgaatatcttcgatatcgagcagctatgcttttcttgaagctgggtgcttttcaa
agtcattcaggtgataagaaaagacctttgcggcgaaatatattggatgctttaatagaa
gcaaaggaggaagcaagtaatcataaaagaagttgcttgcatttttgggagcttcttggg
cagcttttttatggtatcgaggatccagaagagcataatcttgctcaaaatcaacttaaa
gaggaactgctttggcttgagacagcacctgcagctgttgatgaagaggacaaattgatg
gaggggcacttgattctgaccagggtacttgtagaaatattggattgccgcattattggc
tcttcaaagggtccttatggtcaaagtttagtgcataagcttgtcagcactttcctattt
ccagagtctacattcctatggcatgatgaggcaacaaatggtaataacagaccaactgga
gtccaatttggaattctaggaacatctggggataacgaaagagtattgcaatcaaagtgt
ggaacaagaggaagccgtgataaggcatttgatttattaatttgtttggcaactcattgt
acagagagcctccatgagcttgttgagctgctgatcaaaatacattttacagatgaatta
gttgattgggagcaaccgtcatcgtatggtcagaagacggtgggaggttatgttgggctt
aaaaatggtggcgcaacatgctacatgaactctgtttttcagcagcttttcatgcaacct
gaagtccgtaagactgttttaggttgtattgaatgtgctgatgcagagaaaaagaattct
gttctttttcaaatacaagccatgtttggtgctctacttggcagtagtctggaccattac
actccacaaggtttttggggtgcttttcgcaaccctgatggcatgcctataaatatacgg
gaacatcaagatgcatttgagttcttcaatcgcctttatgatgccattgatgagacactt
aaaacatatcatccagaggcaacattggcaaaaatctttggtggcatatttgcacagcag
atcatctgtcggggatgtcctcataaaagtgagaaagaagaagcatttgcagctattagt
gtggatgtaaagaataagaagaacttgcttgaatcacttgaatcatttgtccaaggcgat
ttacttgagggtgaggatgcatatctctgtgagaaatgtaacaagaagtttgatgcgtta
aagcggacatgtgtaaagtccttgccaaatacattagtaatccacttaaagcgttttgac
tttgattatgagaccatgcaacaattgaagttaaaggaccgatttgagtttcccattcac
ttggatatgaaaccatacactgttgaaggtcttgcattacgagagtctcagagtcaggga
attggcaattctgaacgctcagcagttaatgaaggcagtcaaggagaccttagtgattta
agatcagattcatattatcagtatgatcttgtcggtgttgttgttcatagtggaactgca
tttgctggacattactactcgtatataaaggaacgtcctggagatggtcttctaaatggt
cggaaagcaggaactggagggtatgtggctgatgcaaagtggtggatgtcatttgatgat
aagcaagtacaaccatatgatctaaaaaatttagaaagggattgttttggaggaaagtat
actatggatgtgtatgataacttcctcaaaacaaatgctccacaagaatatgataaacct
aatagtgcatatatgcttctgtatgaaagaagtagatctgaggtaaagtgtatgtgtgcc
cccttagattctcctgcagggagcattacttctgatggcgatggagatgcattaatgaaa
gagatgcaacaaatgggacccttagaaaagagtacctatatagagatgccaccatcaatt
cattattgtgtatggagggagaatttgaaatttgtacatgagatgcatctattggataag
gactattttcagtttcttttgagactagtggaaaccaatattgacttgatagataaaagg
aattgtacaaagcagctagtgaatggacagcatggcacaagagcagttcttatgacagat
gctattcgagatgaatttacaaaattaaatacaattttggccacaaaatttttattcact
gtatatatgcacacccatcagaatctgcgggatgatctaaaccattggaaggctctcttg
tttaagatgtttgaatgcagtcctgttgcctctaacagttatatttctacaatggtaaaa
caaccaaattggctatttgagtaccttatgaagtgcccaattgaggagattaaacaggtg
tttgtcactcttctagtacaagcattacgatgtgctgtcaaatttctccatgatccactt
tatccagatttttgtgtgtcttcgggttttcatatagatgacttgattgatgttctgctt
gcgtttcttaaagatggagcaatgctagagtgtaatcttcacaagtattttgaagtcata
atggagtatgctagacttgggccagatcagcgcaagcacttgctgcaaaaaatgatcttt
agtcgtctgattggtttcacaacaaaagtgaatcttcaggttgcaaagtcagacatcaca
tatttgcattcaattgtatctctattgttgcgaagttgtgatacatcgggtttgaacaat
gatgccgagcagaggatggttcttccgaatccactgcagctcccaggacaaaccattccc
ttacctaaggatgcggaagaagcaatatttaagcatcgtgtgtatactaatattctgatc
gacacttgtgcagaccaagaggaagccatcaaactactgaaattttgtagctggcagaac
caggctttcagtgtgtgtttgctgcaggatataatggagcttgtccacaggtctttagat
aatgaaataaatgatctcttacatctgctgatggaattactcctcctgaatgattcgttg
caattgtcaaggcaagagataactcttcttggctttgagaacttccctcttggaatcatg
gacttacttacaacccaagacagaatgagctcacaaaagcgttatacactgatcaagttt
gtcgtaaagctagttgctcaatctccagatacacgtttactattacttggtaagcaggtg
gagtggatgcgagttgttgaatggctccaagatcagctgcaaaccactggagtctccctt
cctataagtggttctagggtatccagcgaaaatccatcccggagccgtttgcagagaact
aatacagcagatcatactcttctccttgcacgcaagttgttcaacacatcagagtcataa
DBGET
integrated database retrieval system
