Cryptomeria japonica (Japanese cedar): 131040515
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Entry
131040515 CDS
T10556
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
cjf Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:
cjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjf04121
]
131040515
Enzymes [BR:
cjf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131040515
Ubiquitin system [BR:
cjf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
131040515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
Rtf2
Nepo_coat_C
Motif
Other DBs
NCBI-GeneID:
131040515
NCBI-ProteinID:
XP_057829442
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All DBs
Position
6:complement(137599992..137647837)
Genome browser
AA seq
381 aa
AA seq
DB search
MELNNINDAFDRVSKKQKMSFTKTQDVIDSIGQEIELALRKLVDGSGVDQKAVIAELNAK
LNEIGPANQLAGTQKELNPAVNKYGKAFEKQFHPDIAKAYREVEFDGHVINMIIASHFYR
QGLFELGDCFVREANEPDAASLKVPFVEMYQILEQLKAGNLQPALAWASVHRDELLQKGS
SLEFKLHRLRFLQIVQGGSRNDALQYARSFFALFASQHMAEIQKLMACLLWVDRLEVSPY
SDLFSNSHWDALGLELIQECCSLLGQSYESPLQVTISAGGQALPTLLKLANVMALKRQEW
HNMKQLPVEIELDREFQFHSIFACPVSRDQSTDDNPPMLMQCGHVLCKQSIAKLSKGNSR
TFKCPYCPNETTVANCKQLYF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggagcttaataacatcaatgatgcttttgaccgagtttccaagaagcagaagatgtca
tttacaaagactcaggatgtgattgattcaattggacaagaaattgaattggctttaaga
aaacttgtagatgggtctggtgttgatcagaaggcagttattgctgaattgaatgcaaag
ttgaatgaaatagggccagcaaatcagttggcaggaacacaaaaggagcttaatcctgca
gtgaataaatatggtaaagcttttgagaaacagtttcaccctgacatagccaaggcatac
agggaagtggaatttgatggccatgtcataaacatgataattgcatcacatttttacaga
caagggttgtttgaacttggagactgttttgtaagggaggctaatgaacctgatgcagca
tctttgaaagttccctttgttgaaatgtatcagatacttgagcaattgaaagcaggaaat
ctccagccagctcttgcatgggctagtgttcaccgtgatgaactcctgcagaaaggatct
tctcttgaatttaagcttcatcggttgcgatttctgcaaattgttcaaggaggtagtaga
aatgatgccttgcaatatgcaaggagtttctttgcactgtttgcgtctcaacatatggca
gaaatacaaaagcttatggcttgcctcttgtgggtagatcggcttgaggtctctccatat
tctgacttgttctctaattcacactgggatgcccttggtttagaattaatacaagaatgt
tgcagtctcctgggccaatcttatgagagtccacttcaggtaactatctcagcaggtggt
caagcacttcccacactgttgaaattggctaatgttatggctctgaaaaggcaagagtgg
cataatatgaaacagttgccagtggaaattgaattagatagggaatttcaatttcattct
atatttgcttgtccggtgtctcgggatcaaagtacagatgataatcctccaatgctgatg
cagtgtggtcatgtgctttgcaagcagtcaattgcaaaactttcaaagggaaattcacga
acatttaagtgcccgtactgtcctaatgaaacaaccgtggcaaattgtaaacagctttac
ttctga
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